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ncats / bard

Sources for the BioAssay Research Database
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Search for assays containing "Endometrial Cancer" throws ClassCastException (case-sensitive issue) #25

Closed jerilevine closed 12 years ago

jerilevine commented 12 years ago

This URI returns a stack trace:

http://bard.nih.gov/api/v9/search/assays/?q=%22Endometrial+Cancer%22

Stack trace:

java.lang.ClassCastException: java.util.ArrayList cannot be cast to java.lang.String gov.nih.ncgc.bard.search.AssaySearch.run(AssaySearch.java:172) gov.nih.ncgc.bard.rest.BARDSearchResource.doSearch(BARDSearchResource.java:414) gov.nih.ncgc.bard.rest.BARDSearchResource.runAssaySearch(BARDSearchResource.java:387) sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) java.lang.reflect.Method.invoke(Method.java:597) com.sun.jersey.spi.container.JavaMethodInvokerFactory$1.invoke(JavaMethodInvokerFactory.java:60) com.sun.jersey.server.impl.model.method.dispatch.AbstractResourceMethodDispatchProvider$ResponseOutInvoker._dispatch(AbstractResourceMethodDispatchProvider.java:205) com.sun.jersey.server.impl.model.method.dispatch.ResourceJavaMethodDispatcher.dispatch(ResourceJavaMethodDispatcher.java:75) com.sun.jersey.server.impl.uri.rules.HttpMethodRule.accept(HttpMethodRule.java:288) com.sun.jersey.server.impl.uri.rules.RightHandPathRule.accept(RightHandPathRule.java:147) com.sun.jersey.server.impl.uri.rules.ResourceClassRule.accept(ResourceClassRule.java:108) com.sun.jersey.server.impl.uri.rules.RightHandPathRule.accept(RightHandPathRule.java:147) com.sun.jersey.server.impl.uri.rules.RootResourceClassesRule.accept(RootResourceClassesRule.java:84) com.sun.jersey.server.impl.application.WebApplicationImpl._handleRequest(WebApplicationImpl.java:1483) com.sun.jersey.server.impl.application.WebApplicationImpl._handleRequest(WebApplicationImpl.java:1414) com.sun.jersey.server.impl.application.WebApplicationImpl.handleRequest(WebApplicationImpl.java:1363) com.sun.jersey.server.impl.application.WebApplicationImpl.handleRequest(WebApplicationImpl.java:1353) com.sun.jersey.spi.container.servlet.WebComponent.service(WebComponent.java:414) com.sun.jersey.spi.container.servlet.ServletContainer.service(ServletContainer.java:537) com.sun.jersey.spi.container.servlet.ServletContainer.service(ServletContainer.java:708) javax.servlet.http.HttpServlet.service(HttpServlet.java:717)

If you use all lower-case, however, it works.

caodac commented 12 years ago

The fix is similar to issue #21.

caodac commented 12 years ago

Sorry, ignore previous comment (wrong issue).

caodac commented 12 years ago

Ok, now it's fixed.

jerilevine commented 12 years ago

Looks good, thanks!