Open greenmna opened 1 month ago
Hi @greenmna,
Thanks for opening this issue. We are going to investigate and I will comment on this thread with any updates.
Best, Eric
Eric Cox, PhD [Contractor] (he/him/his) NCBI Datasets NIH/NLM/NCBI eric.cox@nih.gov
Describe the bug Downloading genome information on the Assembly BioSample Strain yields a column name containing an extra whitespace
To Reproduce
datasets summary genome accession GCF_000196515.1 --as-json-lines --assembly-level complete --assembly-source RefSeq | dataformat tsv genome --fields assminfo-biosample-strain > my_report.tsv
Steps to reproduce the behavior:
datasets
to download a summary of any number of given genomesdataformat
to output a tsv file for genome information, specifically declaring the fieldassminfo-biosample-strain
Ctrl + A
to see the extra white space proceeding the word "Strain"Expected behavior It was expected to be a string with no extra white space at the end like so: "Assembly BioSample Strain" What is instead occurring is the following: "Assembly BioSample Strain ".
I'm not sure if the way I'm providing arguments is the issue, but I just updated to 16.24.0 and it is still present in this column. As far as I'm aware, though I've not exhaustively checked, I've had no other issue with other column names.
Thank you!