ncbi / egapx

Eukaryotic Genome Annotation Pipeline-External caller scripts and documentation
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Crash when running 0.3.0-alpha #55

Open richard-burhans opened 5 hours ago

richard-burhans commented 5 hours ago

I'm getting a failure in nf/subworkflows/ncbi/shared/diamond/main.nf. I due to using mkdir instead of mkdir -p

victzh commented 4 hours ago

Can you please provide us with the details of your configuration and command line. Also, an actual error file would be helpful. I don't think that blindly adding -p solves the actual problem, not just masks it. As we don't have this during our own test runs I would like to know the detailed circumstances of this error.

Thanks,

Victor.