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ncbi / fcs

Foreign Contamination Screening caller scripts and documentation
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[FEATURE REQUEST]: shebang for `fcs.py` #60

Closed schellt closed 1 week ago

schellt commented 7 months ago

Is this a feature request for FCS-adaptor or FCS-GX? This is a feature request for FCS-GX.

Describe the problem you'd like to be solved After making fcs.py executable, running the script directly, instead of python3 fcs.py (as in the wiki) causes an error. It would be more convenient if the shebang would be already present.

Describe the solution you'd like Add #!/usr/bin/env python3 as the first line in fcs.py.

Describe alternatives you've considered No alternatives considered.

etvedte commented 7 months ago

Hello,

We will plan to add this in a future patch or release. Since we just released v.0.5.0, I don't anticipate this being added in the immediate future. Please continue to use python3 fcs.py for now.

Eric

etvedte commented 1 week ago

This has been added for v0.5.4 https://github.com/ncbi/fcs/raw/main/dist/fcs.py