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ncbi / icn3d

web-based protein structure viewer and analysis tool interactively or in batch mode
https://www.ncbi.nlm.nih.gov/Structure/icn3d
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issue with state files #19

Closed mxasf closed 4 years ago

mxasf commented 4 years ago

Hi all - First I want to thank everyone for this great tool. I teach college organic chemistry and use this to show protein-drug interactions. I love PyMol but for teaching, this is much more very ideal for teaching purposes and something students can use at home.

I noticed an issue with "state files" not saving all the key details of the state, sort of like how a PyMol project file works. Here are three attachments (a) a PNG that was created showing biotin-streptavidin and its key interactions (b) the statefile that was saved after step (a) (c) after I re-loaded the statefile, I create a new PNG. I would imagine it should be the same as (a) but it is different in color, and the key residues are not shown.

It appears that not all aspects of the "state" are being saved. Thanks!!!! -marc anderson (SFSU Department of Chemistry)

1STP-initial

1STP_statefile.txt

1STP-later

jiywang3 commented 4 years ago

Hi Marc, Thanks for your detailed bug report. I just fixed it. Please let me know if you have any suggestions. By the way, it's easier to use "Share Link" in the File menu than to save statefile. Jiyao