Closed kdyoung100 closed 1 year ago
Thank you, user @kdyoung100 for your report, this is an unfortunate problem related to a third party operations problem, which we are going to fix in the next release. For now the workaround is to remove "publications:" line from submol.yaml
input file for your example.
This issue is a duplicate of #230
For now the workaround is to remove "publications:" line from submol.yaml input file for your example.
I have added a somewhat simpler workaround option by modifying, temporarily, out test case to eliminate aforementioned publications: section, so you can, if you want, wipe out existing installation and reinstall PGAPx with new test data....
PGAP version 2022-10-03.build6384 is up to date.
commend ./pgap.py -r -o result /data1/tools/pgap/test_genomes-2022-10-03.build6384/MG37/input.yaml
i don't know error
please tell me how to fix the error
cwltool.log