Open Hemantcnaik opened 3 years ago
Hi, Please read the docs in page: https://pm4ngs.readthedocs.io/en/latest/pipelines/chipseqPipeline.html#creating-the-differential-binding-detection-from-chip-seq-data-project
when you run the pm4ngs-chipseq --sample-sheet my-sample-sheet.tsv
coomand line, question number six is:
Select sequencing_technology:
1 - single-end
2 - paired-end
Choose from 1, 2 [1]:
Select 2 for paired-end samples and the whole pipeline will be configure for that.
Okay Thank you.
Hello,
How can I run this pipeline for paired end reads
Thank you