An SRA tool that takes as input local fastq file from a clinical infection sample, identifies and removes any significant human read, and outputs the edited (cleaned) fastq file that can safely be used for SRA submission.
Apologies @kevinlibuit - I have pushed the current feature branch but have not yet merged into a master branch. When I do I will also update docker image.
Apologies @kevinlibuit - I have pushed the current feature branch but have not yet merged into a master branch. When I do I will also update docker image.