Open sa2adeel opened 1 month ago
What is the output of the following?
align-info path/SRR22287940
Here is a subset of the output (let me know if you want the whole thing):
JTFH01000001,chrUn_JTFH01000001v1_decoy,false,remote JTFH01000002,chrUn_JTFH01000002v1_decoy,false,remote JTFH01000003,chrUn_JTFH01000003v1_decoy,false,remote JTFH01000004,chrUn_JTFH01000004v1_decoy,false,remote JTFH01000007,chrUn_JTFH01000007v1_decoy,false,remote JTFH01000008,chrUn_JTFH01000008v1_decoy,false,remote JTFH01000012,chrUn_JTFH01000012v1_decoy,false,remote ... JTFH01001664,chrUn_JTFH01001664v1_decoy,false,remote JTFH01001669,chrUn_JTFH01001669v1_decoy,false,remote JTFH01001676,chrUn_JTFH01001676v1_decoy,false,remote JTFH01001677,chrUn_JTFH01001677v1_decoy,false,remote JTFH01001996,chrUn_JTFH01001996v1_decoy,false,remote JTFH01001997,chrUn_JTFH01001997v1_decoy,false,remote JTFH01001998,chrUn_JTFH01001998v1_decoy,false,remote KN707607.1,chrUn_KN707607v1_decoy,false,remote:path/SRR22287940/KN707607.1 KN707608.1,chrUn_KN707608v1_decoy,false,remote:path/SRR22287940/KN707608.1 KN707609.1,chrUn_KN707609v1_decoy,false,remote:path/SRR22287940/KN707609.1 KN707610.1,chrUn_KN707610v1_decoy,false,remote:path/SRR22287940/KN707610.1 KN707611.1,chrUn_KN707611v1_decoy,false,remote:path/SRR22287940/KN707611.1 KN707612.1,chrUn_KN707612v1_decoy,false,remote:path/SRR22287940/KN707612.1 KN707613.1,chrUn_KN707613v1_decoy,false,remote:path/SRR22287940/KN707613.1 KN707614.1,chrUn_KN707614v1_decoy,false,remote:path/SRR22287940/KN707614.1 KN707615.1,chrUn_KN707615v1_decoy,false,remote:path/SRR22287940/KN707615.1 KN707616.1,chrUn_KN707616v1_decoy,false,remote:path/SRR22287940/KN707616.1 KN707623.1,chrUn_KN707623v1_decoy,false,remote:path/SRR22287940/KN707623.1 KN707626.1,chrUn_KN707626v1_decoy,false,remote:path/SRR22287940/KN707626.1 KN707628.1,chrUn_KN707628v1_decoy,false,remote:path/SRR22287940/KN707628.1 KN707630.1,chrUn_KN707630v1_decoy,false,remote:path/SRR22287940/KN707630.1 KN707631.1,chrUn_KN707631v1_decoy,false,remote:path/SRR22287940/KN707631.1
What is the output of the following?
ls -l path/SRR22287940/JTFH01
-rw-r----- 1 usr gdc 1322174 Jul 8 16:16 JTFH01
What is the output of the following?
vdb-dump --info path/SRR22287940/JTFH01
acc : JTFH01
path : path/SRR22287940/JTFH01
size : 1,322,174
type : Database
platf : SRA_PLATFORM_UNDEFINED
SEQ : 1,998
SCHEMA : NCBI:WGS:db:contig#1.1
Thank you for taking the time to help!
Do all other files in SRR22287940 directory have the same permissions as JTFH01? ('Others' cannot read it)
Yes, that is correct.
-rw-r----- 1 usr gdc 1322174 Jul 8 16:16 JTFH01
-rw-r----- 1 usr gdc 17184 Jul 8 16:10 KN707607.1
-rw-r----- 1 usr gdc 17188 Jul 8 16:10 KN707608.1
-rw-r----- 1 usr gdc 16836 Jul 8 16:10 KN707609.1
-rw-r----- 1 usr gdc 16774 Jul 8 16:10 KN707610.1
-rw-r----- 1 usr gdc 16701 Jul 8 16:10 KN707611.1
-rw-r----- 1 usr gdc 16685 Jul 8 16:10 KN707612.1
-rw-r----- 1 usr gdc 16830 Jul 8 16:10 KN707613.1
-rw-r----- 1 usr gdc 17206 Jul 8 16:10 KN707614.1
-rw-r----- 1 usr gdc 16909 Jul 8 16:10 KN707615.1
-rw-r----- 1 usr gdc 17203 Jul 8 16:10 KN707616.1
-rw-r----- 1 usr gdc 17356 Jul 8 16:10 KN707623.1
-rw-r----- 1 usr gdc 22556 Jul 8 16:10 KN707626.1
-rw-r----- 1 usr gdc 17150 Jul 8 16:10 KN707628.1
-rw-r----- 1 usr gdc 17004 Jul 8 16:10 KN707630.1
-rw-r----- 1 usr gdc 16912 Jul 8 16:10 KN707631.1
-rw-r----- 1 usr gdc 16744 Jul 8 16:10 KN707633.1
-rw-r----- 1 usr gdc 22488 Jul 8 16:10 KN707637.1
-rw-r----- 1 usr gdc 16749 Jul 8 16:10 KN707639.1
-rw-r----- 1 usr gdc 16837 Jul 8 16:10 KN707641.1
-rw-r----- 1 usr gdc 17161 Jul 8 16:10 KN707642.1
-rw-r----- 1 usr gdc 17140 Jul 8 16:10 KN707643.1
-rw-r----- 1 usr gdc 16683 Jul 8 16:10 KN707644.1
-rw-r----- 1 usr gdc 16921 Jul 8 16:10 KN707647.1
-rw-r----- 1 usr gdc 16801 Jul 8 16:10 KN707648.1
-rw-r----- 1 usr gdc 16869 Jul 8 16:10 KN707649.1
-rw-r----- 1 usr gdc 16795 Jul 8 16:10 KN707650.1
-rw-r----- 1 usr gdc 16898 Jul 8 16:10 KN707653.1
-rw-r----- 1 usr gdc 17122 Jul 8 16:10 KN707655.1
What is the full output of the following?
vdb-dump -R1 path/SRR22287940/JTFH01
ACCESSION: JTFH01000001
ACC_CONTIG_LEN: 6
ACC_PREFIX: JTFH01
ACC_VERSION: 1
AMBIGUITY_MASK: 0, 0, 0, 0
ANNOT:
BASE_COUNT: 4357270
BIO_BASE_COUNT: 4357270
CIRCULAR: false
CLIP_LEN: 25139
CLIP_START: 0
CMP_BASE_COUNT: 4357270
COLOR_MATRIX: 0, 1, 2, 3, 4, 1, 0, 3, 2, 4, 2, 3, 0, 1, 4, 3, 2, 1, 0, 4, 4, 4, 4, 4, 4
CONTIG_NAME: decoy00001
CONTIG_NAME_ROW_RANGE:
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CS_KEY: T
CS_NATIVE: false
DESCR: 49, 128, 182, 128, 48, 128, 162, 128, 48, 128, 160, 128, 26, 12, 72, 111, 109, 111, 32, 115, 97, 112, 105, 101, 110, 115, 0, 0, 161, 128, 26, 5, 104, 117, 109, 97, 110, 0, 0, 163, 128, 49, 128, 48, 128, 160, 128, 26, 5, 116, 97, 120, 111, 110, 0, 0, 161, 128, 160, 128, 2, 2, 37, 134, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 165, 128, 48, 128, 160, 128, 160, 128, 48, 128, 160, 128, 26, 4, 72, 111, 109, 111, 0, 0, 161, 128, 26, 7, 115, 97, 112, 105, 101, 110, 115, 0, 0, 0, 0, 0, 0, 0, 0, 162, 128, 48, 128, 48, 128, 160, 128, 2, 1, 17, 0, 0, 161, 128, 26, 31, 80, 111, 111, 108, 32, 111, 102, 32, 50, 53, 52, 32, 112, 117, 98, 108, 105, 99, 32, 83, 71, 68, 80, 32, 115, 97, 109, 112, 108, 101, 115, 0, 0, 0, 0, 0, 0, 0, 0, 163, 128, 26, 129, 154, 69, 117, 107, 97, 114, 121, 111, 116, 97, 59, 32, 77, 101, 116, 97, 122, 111, 97, 59, 32, 67, 104, 111, 114, 100, 97, 116, 97, 59, 32, 67, 114, 97, 110, 105, 97, 116, 97, 59, 32, 86, 101, 114, 116, 101, 98, 114, 97, 116, 97, 59, 32, 69, 117, 116, 101, 108, 101, 111, 115, 116, 111, 109, 105, 59, 32, 77, 97, 109, 109, 97, 108, 105, 97, 59, 32, 69, 117, 116, 104, 101, 114, 105, 97, 59, 32, 69, 117, 97, 114, 99, 104, 111, 110, 116, 111, 103, 108, 105, 114, 101, 115, 59, 32, 80, 114, 105, 109, 97, 116, 101, 115, 59, 32, 72, 97, 112, 108, 111, 114, 114, 104, 105, 110, 105, 59, 32, 67, 97, 116, 97, 114, 114, 104, 105, 110, 105, 59, 32, 72, 111, 109, 105, 110, 105, 100, 97, 101, 59, 32, 72, 111, 109, 111, 0, 0, 164, 128, 2, 1, 1, 0, 0, 165, 128, 2, 1, 2, 0, 0, 166, 128, 26, 3, 80, 82, 73, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 163, 128, 48, 128, 48, 128, 160, 128, 2, 1, 7, 0, 0, 161, 128, 26, 22, 112, 111, 111, 108, 101, 100, 32, 109, 97, 108, 101, 32, 97, 110, 100, 32, 102, 101, 109, 97, 108, 101, 0, 0, 0, 0, 48, 128, 160, 128, 2, 1, 10, 0, 0, 161, 128, 26, 19, 66, 108, 111, 111, 100, 32, 97, 110, 100, 32, 99, 101, 108, 108, 32, 108, 105, 110, 101, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 183, 128, 48, 128, 160, 128, 2, 1, 1, 0, 0, 161, 128, 2, 1, 20, 0, 0, 0, 0, 0, 0, 178, 128, 161, 128, 48, 128, 160, 128, 2, 2, 7, 222, 0, 0, 161, 128, 2, 1, 11, 0, 0, 162, 128, 2, 1, 21, 0, 0, 0, 0, 0, 0, 0, 0, 177, 128, 161, 128, 48, 128, 160, 128, 2, 2, 7, 222, 0, 0, 161, 128, 2, 1, 11, 0, 0, 162, 128, 2, 1, 21, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0
EXTRA_SEQIDS:
FEAT_ROW_END:
FEAT_ROW_START:
FIXED_SPOT_LEN: 0
GAP_LEN:
GAP_LINKAGE:
GAP_PROPS:
GAP_START:
GB_STATE: 0
GI: 725026265
HASH: -604913549
LABEL: contig
LABEL_LEN: 6
LABEL_START: 0
MAX_SPOT_ID: 1998
MIN_SPOT_ID: 1
NAME: gi|725026265|gb|JTFH01000001.1| Homo sapiens isolate Pool of 254 public SGDP samples decoy00001, whole genome shotgun sequence
NUC_PROT_DESCR:
PLATFORM: SRA_PLATFORM_UNDEFINED
PROT_COUNT:
QUALITY:
RD_FILTER: SRA_READ_FILTER_PASS
READ: CCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCCTCCTCGGCCTCCCAAAGTGCTGGGATTACAGGGACAAACCACTGCGCCCGGCCAGAGCATATTTTAAAAGCTACAATAATTAAAACAATGTGGTATTGGAAGAAAAATAGACAAAAGTATAAAAAAAGTCAAGAAACAGCAGCAAATATACACAAGAATTTACTATCTGATAAAGATGACATTTTAAATAAGTGAAGAAAAGATCAATGTTTTTAAGCAGTGATGTCAGCCCAACTGGAAGAAAATGAGCTGGATTTCTAGTTTACACTGTATACCCAAACAAATTTTAGAGGAAACAATTATACATGTGAACAATGAAATAATCTTAGATGTCATACCTAAGAAATCTTTGCCTAGCCTTACAGAAAACACTAGAAGAAAAAAGGGTAGAATTTTTTTCATAATTGGAGTGAGGAAAAAATCATAAAACCTAGCATCCATAGAACAAAAGATTGCTACTTCATATATATATTTCTCATTTTTTGAACAGCTTTATTGAGGTGTATTTGCTATACAGTAACCCTTACATATATAAAGCAAATGATTTGATAGTTTTTACATATGTATACAGTTGTAAAACCACCATTGCAATCAAGATAACAAACACATCTGCCACTCTCCATGGCTCTTGCCCTTTGTAACCTGTCCCTCCAACCCCGCCCCACCCTGCTCCCCCATCCCAGGTGCACTCTGGTCTGCTTTCTCTCACTACTGACTAGTTTGCTTTCTCTAGAATGTTCTGTAAACAGAATCACACAGGGTATACTCTATCTTGTCGTATTTCTTTCACTCAGTAGAACTATTTGGAGATGTATCCATGTTGTTGCGAGTATCATTAGTATTTTCCTTTTTATTCCTGAGTAGGATTCTACTGTACAGATATACCTCCATTTGTTTATCCAGTTATCTGTTGATGGACATTTGGGTGCTTTGCAATTCGGGCTGCTGTGAACATTAAGCATACGTCACTGTATGGACGTGTGTCTTCATTCCTCTTGGTCTGTCTGAGCTCCACACCTAGGGAGGCTTTGGAATTGCTGGGCCATGTGATAAGTTCTATTCAACGTGTTAGAGAAATTGCTGAGGTGTTTCGCAAGTGGCTGCCCCATTTTCCGTCTCCACCACCAGCTTTTGATGGTTCTAATTTCTTCACGTCCTCACCAACACTGTTACTGTCTGTTGTATGTTTATTATTATCATTGTGGCCATGCCGGTGGGTGCAGTGGTATCTTGCTGTGGTTTTTATCTGCATCTCCCTAGTGACTAACGATGCCGAGCATCCTTTGAAGGCCACGTTACCATGATGACATCTTCTTTGGTGAACTGTCTACTGAAATCTCTTGCCCATTTTTTGTTGGCTCATTTGTCTTTTTATCATTCAGTTTAAGAGTTTTTAACATACTCTAGATGCAAGTCTTTTTTATCAGATATACGATTTGCAAATATTTTCTCCCAGGCTGTGGCTTGTCTTTATATTGTCTGAACAGTATCTTTTGAAGGCCAGAAGTTCTTAATTTTGATGACATTCAATTTATCATTTTTTCCTTTTGGTGTCATGTCTAAGAAATCTTTGCCTAACAACATAAAAACTTGAAATTTTTGAATTATGAAAAGGAATAGAGACAAAGAGAAAAGATAAATGAATAGATCAAAATATTTGAATTCATAGTATAAAGTGCTAATTTGTCTAATAGATAAACAGCTTTCACAAATCAATAAGCAAAAGGCCAGCCATCTGACAGAATGCATTGCCAAGGAATACAAGCAGACAGTTCACAGAAAAGGAAATACAAATGTCTCCTCCACAGAAAACTCAACTTTACTCATAAAAAGAGAAACTCAAAACTACAGCAAGATTTCATTGACTTAACCCTCAAGTGGGCAGAGATCAAAAAGTTGGGTGGCCACTGGGTTGGTAAGGAGGTAGGGGGTAGGAGATGGACTTTCTTACAGTGTCTGACAGAGCATGTATTAGAACAGAATCTACAGAGAGCCATTTGTCAATTACCTGTCAATACAACATTCCTTTTCATCCAAAATTGCACTTCAGGAAATTTATCTTTTGCATATACTGACTCATGTGCAAGATGTACGTGTTCAAAGATACCCATTGCAGCACTGGGTAAATGTGCAATATTGAAAGAAATCTATCAGCAGGAGACTGATCAGGTAGCGTATGGCTGATTCATACAATCAGACAATGGGACGTTGCTGGGGGAGTGTCCTCCCCTACCCAGGTTCAGGTTTCAATGTGCAGTAAGCCCCCTGCCTGGCTTTCTGTCCCAACCCCCAGTTAAAAAAGAGAAAGGGGCTCAGCTTCACAAATGGACGAATTAGAAGACACATTTCCAGGAGGTTCCCTCCTGTACCTTTTGAGTTTTATGCATATACTGTCATTCAAAACAAAGCAAAACTGGCTGGGTGCGGTGGTTCATGCCTAAAATCCCAGCAGTTTGGGAGGCCGAGGTGGGAGGATTGCCCAGGAGTTTGAGGTATCAGTGAGCTATGATTGTGCCACGGCATTCCAGCTTGGGTGACAGAGCAAGACCCTGTCTTAAAAAAAAAAAAAAAAGAGAGAGAGGGAAGAAATAAAATGGAAATCAGCATTTAGGCAGCGCTTTCAGACTGTGAGCACGCTGAAAGAAGAATGCACAATCATTAAAGAAAATGCACAATTATTCATCACCTACTTTGCGCTAGGCACTTTCTTCTAAGCCTCTCAACAACCCTGCAATAAGTGCTTATTATTCTTTACCATTGGGAGCCCAGGTTCAGAGCGGCAGAGCCCTTGCTTGAGGTGGCTCAGTTCTGTCTCCACTGACACCTGCCTAGGAAGCTTTACTTCCAACCTCCTGAACACACAAAAACACACTTTATTAGTACTTGTTTCCTTAATGCCTGCTGCAGGGTCTGGCCCTAATAATCATGCAGTAAGTTCTTGTAGGGTCACACAGAGGAGGTCAATGTTGGTGAGTCTCTCATCCCATCACATCGAGGCCGTTGTCCCCTGCTGCGCCCCAGCCAAAGGCTCTGCACATTACTCTGGGCAGAGATTGGAGATGCTGCCTGGGCCCTGATTTTGGACACCCAGCCCGGCACCATGTCGGGGCCATCCTACTCCAAAGTCCACCCCCTTCCTTCCCTGGGCAGAACCAGGAGCTCCATCTCTGTGGCCTGGGCTGAGGTGGGGGTCACCAGGCCCCTCACCCAGGCTTCCCTCTCAAGCACCAACATCCTAAGCCAAAGAAAACTATCCAAGGCTCTATTGTGGGGCTTCCTACAGCTCTTAGGGGAAGTGCAGATGAGGCACTGGGCCACATAAATCTTCTCCAGTGTCCTATAAAGCAGCTCACTTGGCCTCCACAGCTAGAACATTCCATCCCTGTCTCCCAGGCAGCCTCCCTTCCCCAGGATGCCCGGACACCCCTGCAGACACAGGCGGGCACACTCGCTCCCTCATGGCACTGTTACCACTGGTAGATAAGCTCTTCACGAGGAAAGGGACGCACCTGCCTTGTTACTACCGTGTGCAGGGTACCCGGCACCGTGTCTACAGTGAAGTGATGTAGGAGCCGGCTGAGGGATCACGAGTTTCCATTGCTGGAGGTTGAGGGCCCCCACCTGCCAGTCACACCAAGGCTGGTGAAGCTGCCAGCACCTGCCCAGCAAGGGCGGTGAGGCGCAGATCACTGACGGCCTATTTCGGAGCTGTTGGGTATTTGGTAGAACATTCCAAAAAGCAGAAGCTACCAGCAAATGTAGTCTAAGCCTTGAAACTTACTTTCGTTTTTGGATAAGATGGAGTCACCTTATCATGCAGGTTGCTACCTAAGAAAGACGCCCCTTCAGTAATCCCCACTTCTGTAAAACACACCTGAGGTTTCACCACAAAGCTCCCAAACACATTCGTTCCAAATTGCTTAACTACAGGATCTGCCAGAATCAGCCTGAAGCCCCGCAGTGGCGAAGGAAACGCCGACCGAGTCACCAGGAGGAGCACGTGCGGCCCTAGCAGGCGCGTCCGCTCCCGACTGCTGTGCACGCCGCGTGGGGCACGGGCTTTGGCGTCAGCGTTGCTCGTTTTGACGGGAATCGTTATCATGAAATCTTGTGACACCCACGCCTTGTGCCCTGGTTCATGCAGAGATTAAGAAAAAGCTCCTTACTGTTCATTATTTAAATTAGCCGGTCGGCAACGGCTGGAAGACACCGTGCCCGCCAGTGAAGAACAATGCCAGGCCGGCCGCGCTCACGCCTTCCCACTAGAGGCGGGCCTGGGGGCAGGGCGGGCCTGGGGGGCTGCTCACAGCCCTGGGGGCCCCTCTCGGTGGAGGACCCATTTCCTGTTGTGGAGATTCTTCCCTTTGCAGCCAGGAGAGGGGTCCGGGAGGGCAGATGTGTGCACAGCTCCAACTTCTTGTTTCTCCTTTTCCACGGAGAACATCGACGGAGCGGAAATGTTTGCCGCACGCAGAAGCCTGCAGCTGCATCTCCTCTCCGCCCGCTCCTCGCCCATCAAGCCTTATCGATCTGCAACTGCATTTCGCGCTGAGGTGAAAGTGTTGCGCGCTGATGTGGAATTCTAATCTTCACCGCCCGCTCCCCGCCTGGCCACGGGCGCCCCTCGCACCCCTTCCTCCCCACCCAGCCGGTCCGGCGTGCCTCATTGCAAGTAATTATGCTGCACATGAGTCATTTTTTAATGTTTGGTTTGATACATACAGATTCTTTAAACAATAAAAAAAAATCAGCAAACAGCATCACAATCTGGAAATCTCTTTCTTAACATGGAAAACGGTTTCTTAATGGCACAGGGGGGAACTCAACAGCAAGCTTGACAACATAATGAGGAGATTGTTCCTGGGAAGGGAAGCGCGTTCTTCATGCAGCTCTTACTACTCTCAATAAGATTATTCTCCCTGAATAGCTAATCAGCTTTCTCCAGCTCCCCAAATCCGCGTGCTGGAGGCTGCTCACACGGCTCTCCTTACGCACTAAGTGGCACACAGTGACACCTCGGAGGGCGAAGTCTAAAGTGTTAACAGTATGTGAGCAAACAGCGCAATGGAGGTTGCAGAGAGAGAGGCCTTTGGCAGATGAGCAGCAATTTAGGAAGACGGCTCTGTCACACCTGGGTTGACAACGCTGACAGGGTTTGTTGATCTCTGCTCCCATCTCGAATTTGAGTGTCACGTTTCAACAGAAACGAGAGAAATTAAAAAAAAAAAAAAAGCTTTCAAGAGTCAGCGTTGTTTGCACGGTGTTTGTGACACCGAAACACAAGAGCACGGGGTGGGAGCTGCACTGACCCCGCCTGCAGCTACCCCCACCCTGCCAGAGCCCGCAGAACTGGGTGCAGGGTGAGGCCCGTGGGTCCGGAACAGGGCAAGTGCCCACGGCTGCTCGGGCCCCTCCGGAGCATGTGGTCCTGGACAGTGACACACTTCAAGCCCTGAGCTCACTTGGGAATAAAAGGGCTGATCACAGCCTTGCCTCTGGTCCCGTCGTGGCCCCCACGTTGTTGTCTCAGGGCTTCCGTAGAGGTTGCTCTTCAGGACAGATGACAGGGACCCCAGAGGAAGGCCTGGCCAAGCGTGGGTGTCACCAGACTGCAGGGAGTGAGAAGAGCTGCTGGAGACTGCCCGGCAAGCTTGCCTGGTGCCACAGCCCAGCACATGCCCCACTTTCAAGCAGGTGGCGTCAGACTGTCTGTAGGGCGTAAGAGCGTCCTGGCTCTGCAGGGGTGGCTGAAGCCATTGCGGGCATGTGGAGCCTCATGGAGACGGTAGCCATTTGGGTCCTGAAGCAGCTTCCAGCCTGTCTGGAGCTCTCAGAGTGCCACAAGCACAGATGCAGGGCGTTCTTGACAGCTCACTGAAGACGTGCGTGTGCATCACCCCACGGGTCCCTGGGGCTCCGGGCGTCCCATCTCCATGTCCAGGGCCAGAGGGAGAGGAGGCAGAGCCAAGCCCAGGTGTACTCTAGTGACCCACAGCCCTGAAACACCATAGCCTCATCCAAAGAAAAGCAAGGACACTTGGTGCCTGCAGAACTGAACTGCGCTGGATCCCGCCTCAGAGGCTGGAGAAGAAGGCACACCGGTGGGGCCAGCATGGGGGCCAGATAGCCCTGTCCTTGCCCCTCACTCCGCCTGACTGAGCGCCTCTCAGTCCAGGCAGCAGGAAGCCTCTTCTCCTTGGGAAGCCACTGGCAGTCAGGCTGGCTGTGTGGGGACTTGGCTTCATGCTCCAATATTTGGAAGCTTGATAGAGAGCTTTCACCCTCTACTTGCTTTCTTCCACGTGAGCCCCGTTTTCCCCGGGTGAGAATGCGCTTTGCCGTATTCAGGGTCTGAGCAGCATGTGCCCATATCCTCTCTCCCAACATCCCCATGTCGGGCCCAGAGAGTGCCAGGGCCTGTGGGCTGGGAAGCGGTCACGCCCAGGCGCATTCTGCCCATGCGGCTAGTGCCGTCTGAGAGAATGCACAAGGCGGCCTGCGCTGTGGGCCCTCTGGTCCCAGAGCCACAGTGTGAGTCATGTGCTGCCTCATTGTGAAATGCCCCTGCCCTCTGCCCGATGCAAGGCCCTGGGTGCACGCATGACTCATGGTGGAGGCAGGAGGAAATATGCAAGTTTCTCCACGAACCGGGTGCAGGTGGTCGTGACCTTAATGCCGTTTCCACAGGGGGCCACAGAGACATTCTTTGCAGATTTTTGTGAACACCGTACTCTTGGAGGCCTCCACTCTCAAGCTGGTCCCCAGATGGGCCCGGTAGAAACTCACAGCAAACATGTCTTCCCCAAAGGAAGAATGACAACAGCTGTCTTATTTTGGTGAGGGTAGTTTACAGGGTAGTTTTGGTTATGTTGCAGTGACCCCAAGGTCAGAACCTCAGAGCCGAGATAACCGTTGGAGCTGTGCTCCCCACGCTGGCTCAGCCCCTGGAAGCCTTGGTCTCATGGCTGCCCCGTGTCAGCCGATGGTTCCCAGATCATCAAGACGGTAAGCAAAGCGATGTGGGCACTCCAACCCGCCAGGTCCTCAACATGTCCATGCAGGAGGTACACATGTCCACATCCCACAGTCACCAGCCCAGCCTGGCTTAGCTGAGAAATGCAGCTCTTGTCTGCATGCAGGAGACAAGGCCCAGCAATGAGTCTGAGCAGCACCAAGGTCCGTCCTGTGCGTCAGCTCCCAGGTCTCGGCTCACTGTGCAGGAACCGGAGCTTGATATTTACGACATCTCCTAGGTCATGCACTGTTCATTCATCCGAGGACTAGTTATCGGGAGCTTGTGTTCCTGGAGCTGTGCTCTCCCCTTGCCAGCCTCAGCTCCTCTTCCACCCCAACCTGTGCCCACCACCCCCACACCAGAGGGAAGAAACAACCCCGACCTCAGGTATAGAGTGAAGTCCGGCTGATGCTGGGCTGAAAGAGTAGCTGGATTCTTATTAGGACACAGTAAATGGACCGCACTCAGGAACACGCTCACATCCCAGTCTCTGGATATGGAGGACTTGTGTGTACTGATTCCCCCAGAAACTCATGGACCATGAAAATGACTAAGTATCTCATCTGGCAGGATTTTCATTTGCTCATTGGTATTAGGACAAACAAATGGAAACATCTCCTCTTATTATTCACAGCAAATATGTGGCCACTGCTTTCCTCCCTAACTTCTCAGGCTTAACTGTAAATGCGAATCTCCTGGTGTTTCCTGGAGCTTTCCCCTTCCTTTGTACCATAGGCCCCACATGTCACATTCCTCTGGCACCTCTTTTCCTGCCTTACAGTTACTATCGGCCCTTGTCATCCCCACATCAGGACGCTGAGCTGCGCATGCTGTGTCTGGGCCACGGTCCCCATGAAAATCCTTCCCCTGGTGTTCTGGGTGCCGCCCTCCGGCTGTGCCCTTCCATCCTGGGAAGGTCTGACTGGGGTCCCACGTCACCACGTGGTGGGCCCCACATGCCAGTTCACTCTCGGCTTCCCAGCGCCTCTCTTCCTGCTGCCCTCACCTGCTCTTCTGAGGCTCCTGCAAGGCCCAAGATCCGTCTTTGATGACATTTTTCCTGCTCTCGTTCCTGGCTACAGACTGTTGCCATTTTCCAGCAATGGTTTGAAATAGCATTAGAAAGTTTCATCGAGAACAGAATTCTCTGCCCTACTTCAACATTACGTGTAATCCTATTCTCTGTGAAGCCTCCCCAGCATCACCAGTGGCCATGGAAGTCCCCATCCATGAAACTCCCATGTGGAAACTCCGTAGAGAGACCTCCCATCCCGCTGTGAAGTTCCTGCGTGTCAATGAGAGGCCGGGTTGGGGTAAGATGATCTGCATTGATTTTGAGTCACTGGATGGGAAGACACCAGGGCTGAGATCATTAAGGAAGCTTATTGCTCCGGAAATACACCTGGGCAGAGGCATGTTGTTGACCTCAGAAGCCACGCTGCCTTCCCACACCCTGGTTATTTAATTTTCTTTTGTACTAACTAAAATCAGATTTCTCATTGAGGGTAGAATTTACTGACTTTTCGGATAATACGGAAAGCACACGGGAGGGCTCACCTCATCCTCTGCAATGAGGTGTGCGCAGCATCAGGGTCTGTCTAACCAGGGTCCCCACGGCCAAGCCAAATGAGAGGAGTGCAGACTTCAACTCACAGCAAACCAGCTGAACCCAAGCCTCAAGAGCTTAAAGATTTTGTTAACCAAGATCCACAGACTGAGGACAAGGCAGTTATGCGCTTGAGCTGGCAATAGCCACTGAGCTCAGCGCTCAGCCTGGATCACAGACGGCAGCACCACCATGCTCGGATGCACAGGGTGCGGGGCAGGAGCGTTCAGCCTGGATCACAGACGGCAGCACCACCATGCTCGGATGCACAGGGTGCCGGGCAGGAGCGCTCAGCCTGGATCATAGACGGCAGCACCACCATGCTCGGATGCACAGGGTGCCGGGCAGGAGCGTTCAGCCTGGATCACAGACGGCAGCACCACCATGCTCGGATGCACGGGGTGCCGGGCAGGAGCGCTCAGCCTGGATCATAGACGGCAGCACCACCATGCTTGGATGCACAGGGTGCCAGGCAGGAGCGTTCAGCCTGGATCACAGATGGCAGCACCACCATGCTTGGATGCCACAGGGTGCCGGGCAGGAGCGTTCAGCCTGGATCACAGACGGCAGCACCACCATGCTCGGACGTACGGGGTGCCAGGCAGGTTTGATGTTTCTGTTGATTTTGGCTTCAGCAGTTGAACTCTGGCCTCCATAGGAGGCCCTCCGAGGCCGGAGGGGCCCACACCCTGTATTCCTGCACTTAGTGTCATCCCCGGGCTGGTTAGAGGCTGTCGAAGGTTGGTGAAGCCCTTTGAGCCATCAGGCTGAATCAAGCCTGCAGTGACTTTGTCATCTGTGAAGGATCCTTTCACGGTGAACAAAACTTCAGCTCATCCCCAAACAGACAGACAACATGCTCCTGAGCAGATACGGCATCCTCTGTGGCTCTCCACGCACATCGGAAACATTTTCCTTCAAGCGAGATGAAAATGTGGCAGCTACGCCAACAGCCAGTGCTGAATTCTGTCTCCAGCGAAACGAGGATGGGTGGCTGAAATGGACAGATAATCTAAAAAGGCAAACTTTAGAACACAGAGTATCAATGTGTTCCAAAGCAAACACTTCTTAAGTACCTGGATTACAGGACTTGAATTTCATTTTCTTGTCTTTAGTGCAGAGGAAGCAGACAAGAGAAATGTCTGTGTTAACCTCAAAGATGAGAATTTGGGGTCAGTTCTCAGGGGACAGCCTGTGGCCTGTGTAAACCTCGGCAGTTTCCCTAATTTCTCCCAGCCTCTGTTACCCACACGGCCACCCTGGAAGGAAGACGGGAGGGGTTGTTGGATAGAGAGTTCGCAGTGCGTTAATGAAGCACTCTTGGAGCACACGGGAAGGAGGGATTAGCTCTCACATTGAAGGTGGCATGAAGGCAGGTGCCAGCATGAGGAGGAACGGGAACCCCAGGTAATCCTCCAGTGGCGTCACCTGCCCTCTGGATAACTGAGAGGTGACTAATCTTCTGTAAGTTAATTGTCAGGTGTGGAAAGATTTTGCCCACGGTGAGAGTAGCTCCCGTACGGCACAAAAGGACGGCTTGATTTCCTGCACTTAACACGAGTCACTAGGAGAATCATCTCATCCACCAGCTTCTCCAGTTTTATCAATTATTTATTATTTCCCCCATGCCAAGTTACTTCCATGCATTCCACCCTGTGACAATCACGGAACGCCTGGCTCCTTGTGGCCTGGCAGCACATGGGGCGGCTAGCCCGGACCCTGTGCACACCACCTGGCACGGGACCTGGGGTGGGTGTCTCCCCAGAACCCAGCCCTGACCGGTGGCAGCATGAGGGCCGGTGACCTCTGCGAGAAGCTCGGGGGGGCCTTGCGGTCAGGTCATGTGAGCATGGTTAGCCAAGTGGAGAAGAGCAAACTTCTGGATTCCTAATCAATTCACCTGTTTTGAAATAGAGAGGGATGGTCCCACGGTGAGCACACGGGGTGGGCGTGGCCCTGCTCAGTGCAGGTGGCCAGCCTTGGACTCACACTGGGTGGCCCTCCTGTTCTCCGGGTTCCGCTTCCCAGGCTGTTTCTGTCATTCTGCACCAAAGACCTTCATTCCAGGAGTTACCTACTTAGGCTAAATTGTGAGAATAAAGTGGAGATGGTAGAATTTCCCAGGAGCCGTGCGTATCTTGGGGAAGCGTTTCTTCTCCCAGCCTGTGTCCAGCGTGGGTGGGCTGCGTGGCTTTGTGGATGGAAAAAAGACCCTTCCCATGAAACGGGAGCCCCTCCCCTTCCAGGTTGCTGCAGTCTGTCCTCAGAGAGCCATGCCTTTGACTCACTTTAAATGAGATTTTCTCTTCCCCTGAGGAGAATCATTAACAGATTAATCTAAAAGATTTTCAGAATCTTGCTTGAAAGGCAGATTTTCTTAGAAGAAGAAAAGGAAAAAATAGAAAATTCTGGGTTCCCAAGGTTGGGGGTTGGGAGGAGGGGGCATGGCATCCCCAAAAAGTCAAAGAGTAGAAAAAGAGATGCCGGTGCACCTCCAGGGAAACGCACCTTAACTTGGATGCTCCTTGGTATGTATCCATGACGAGAACAGTGAAGGGCTTGACAATGGGCCAGTCCTACATGCCTGCAGGCCACACCCCCATCCACTGTCAGCAGATCCCCTCTGAGGTCTCCTGACGCCACTCAGAGCAGGCCAGACTCTGTCAGTTCTTCTCTCAGTTCCTGGCATCCTGCACCTGAGGCTTTGAGCACAGCTCAAGTCCCCTCTCCCATTCAGGTTTCCTGCTTGCTCCAACCAGACCCGTTTGCCGAATCCCCTGGGCCTCGCATCCGTGTTTCTATCTTGGCAGTCACCTTCTCTGTCTGGCTGCCCCTCCCCTCTTCCCCTGTGCAGTGGGAACTCTAGATGCCTGTTGAATTGCATTATCATATTCAATGATGAAATTGATGGACAGCAACAACACTCAATGATCAGCAGTAAAATGAAGAGTTACTAACTTTATGGTTAGGTACTTGGCCAATACAATTAAATAATAATTTCCTCCTTTGTATGTGCACCACAATTAAAGGATAAACTCTGCATCAGCAAATGGAGTGTTTTCAGCCAAAGTCAGTCTTAGTCCTGTGACACCGTGGAGCTGGGGCAGACCACCCCCACCTTCCTGGGAGGCTGCACAGGGAAATAGAGAAAACACGGAGATTGGCATAGAGATTCCTTCTCATCCTCAGGTTCCTGACATGCAGGCTGGATAGGACACCACCTTTCCTGGCCATCCTGGAGGGCGGAAAGCGGTAACTGGAGTAGAGTGCTCAGTGACTCATGGGCATAGGTACCCATCACACGTGCAGTGGAGATTTCATTCCCCGGGCTGTCCTATCAAAGCACAGACTGGGTAGCTTAGTACAGAAATTTATTGTCTTGCAGTTCTGGAGGCTGGAAGTCCAAAATTAAGGTGTCGACAGGGCACTGCCCTCTCTGAACCCCCTGAGGAGAATTTTGTCTTGCCTCTTCCAGCTTCCCGTGTGGCCGGCGAGCCTTGGTGTTGCTCAGCTGGTAGACGGTGTCTTCTCCCTGTGTCTTCGCATTGTCTTCTTTGCGTTCCTGTGTCCAGACTTCCCTCTTTCTAAGACACCAGTCACATGGAATTAGTGCTTGCCATAGTGACCACCTCTCAACTTGATGATCTCTGTAAAGTCTCTATTTCAAATAAGGCCACAGGCACAGGTTCTGTGGGTTAGGACTTCAACATAACTTTTTGGGAGGGGATGCAGTTCAACAAATAACAATTGGCTCCCTGACCAACCTTAATGTATTCCTCTCCCCACCTACCCCAAACACTGTGCACTGTGAGGCCAGGTGAGGTCAGTGGTTCTCAAACTTTTTTGTCTGAAGAACCTTTTACACTATTAACAATCACTGAGAAACAAAATGCTTGCTTTTCCCCTGCAGGATATATCTATTGATATTTACCAGGGTAGAAATTAAAAATAGGAAAAATTTTAAATATTCATTTTTAATTAATTAAAAAAATAATAAACCCATTACAGATGCCCCTTGACTTTTCATGGGGTTATGTCCTAATAAAACTATTGTGAATTGAAATTATAAGCTGAAAATGCATTTAATACACCTAGACTACTGAACATCACGGCTTAGCTCAGCCTACCTTAAAGGTGCTCAGAACACCCATGTTAGCCTCCAGTTGGGCAAAATCATCTCACACAAAGTCTATTTTATAATAAAGTGTTGAATAGTTCAAATAATTTGTCGAATACTGAGCTGCAAGTAAAAAAGCAGAATGGTCCTATGGGTGCACCTGCTATGGTCTCTACTGAGCGCGTGTCACTTGAAACCATCCTAAAGTTGAAAAATCTTAAGTGGAACTACTGTGAAGTTGGTGAACATCTGTGTGGAAGTAACTGTATTGTTTGAAAAGGAGTGAGAAGAGCAGCATGGCATCACATTTTTAGAAATCTCTAATATCTGGCTTAATAGAAGTTGGCTGAATTATGATAATGGCTTCTTTCAATCTCTTGCAAAACATTGTTTTGGGGGAAGTATAGGAAGAAAACCAGCTTCTGGCAGATGTGTGTGGAAAGGGAATGCGTATTTTTATAGGCTTTTCCAATCATTATGGATATTCCTTGTGGCTACAAAAAAACTTGAAAAATGGTAGTGCTATAAGATTAGTTGTGGAATCTAAAGCCACACCAGTTCCCTTTTTCACTCTGTTACATCACAAGTCATCAGTCTGTTTGCATGCATGATTTTGTACTTGGACACTATCATTAAAAAATATTGTTTCAGTAAATTTTATACACACACACACTCACACATATATGTAGAGACAGAGAGTGCGTGCACGAGAGAGAGATGGGATTTTTCTCTGTCGCTGAGGCTAGGGTACACTGGTACAATTGTGTGATCATAGCTCACTGCAGCCTTGAACTCCTGGGCTCAAGTGATCCTACTGCCTCTGGCTCCCAAAGCACTGGGATTACGGGTGTAAGCCACCGCATCCAGCCTAGACAATATTTTGAAAATTACATTTGTTAATACCACACATCTCATCAGAAAAGTCTTTAGATCGAGAACATTTCAAGCTCATCGTGGCGGGTATGTTTTCCAAAACTCTAATTTTCACTTGAAGGCTGAAATTTATTATTGGCAACAAATACTGTCAGTTATTTTCTTTGAAGTGATGTTGTGGAGAAAATAAGTAGTGTGCGTTCGTTAAGCATTCTTTCAGACAAAGATGGGATTTCACGGAGAGTGGACAGTGCAGGATCCAGCTGGAACAATCACACGTGCCTCCATCCCTCAGTTTGCAACAGCTTGCACTCCCCATCTTCACATGGGATGTGGGAGAGACAAATACACAAGGGCCAAGGTCTAATACGTTAAAAGCTTTCAGTGCTTCATCCAGAACACCCTATGTGAAAGTGGCTTTTTTCCTGCAAGCGCGTGGTAGGGACCCATGTCGTGGCTCCTGGTGTGGTTGGGCGCAACCACGTTGGCGGATGCTGAGCTGCCATCAGTGTGAACGTCAGTTCGATGAGAGGGTGCCTGTTGAAGTAACATTGCTGCACAGCAAATTACCACAAACGTAGCGGCTACAAACAACCCACAGGTGCCATCTCAGAGCTTCTGTGTGGGTGGCCGAGGCTTAGCCACACCCTCGGCAGGTCTCCCCCGGCTGCAATCGAAATGTCATTTGGGGCTGTAATTCTCATCAGGTCTCAGGTGCGCTTCCAAGATCACATGGACAGTTGGCAGACCTCCGCTTATTGGGGTGATGGCTGAGGACCCTGTCCTCTTGAGAGCTGTGGGCTGGGGGCCGCTCCCAGCTCTGAGATGCCCCTCCCTGTAGATGGCTCACACCATGGCTATTTACCTTTTCCTTTCAAGAGAATCCAAAGAAAAGCTCTGCTTTCAAAGGGCTCACCCGATGAGGCTAGGCCCATACCAAATCATCTCTCTCGATTAATTTAAAGCCAACTGATCTGGGGCCTTGATTACATTTGCAATGTTTTGCCACTTAACATGATCACAGGAGTGATAGCTCATCATTCCAACCCTGACTCAAAGGGAAGGGACTCTACAGGGAGCCTACAGCAGGGTGAGGGTGGAGGAATCACAGGGCTCTCCTAGAACCCTCCCAAGTTTTAAGTCAATACTACCATCGGGACTGGCTACGTAATTTCCAGGGCTCAGTGCAAAATGAAAATGTGGGGGCTCTTCTTCAAAAATTATTAAGAATTTGAAGACTAACAGCTGAGCATTAAAACAAGCATAGCACCTTCTATGCCAGGATCCTGGATGTCTGCCCAGGTCACAGGCTCATGAACATGGCCCTGACTTATTCGCCAACAGTTTTGGTCTTGCAGACACCTCAAAAGGTCCCAAAGACCCTGGGGGATTTGTGGGCCATCTTGGAGAACTGCTGAGTCAAAGCAGCTCAATAATTGTCTGTGGGGACATTTGTCTGACCTTAGTCATGTAGGAAGTCTAAGAAGTTTCTAGCAGCAGTGAGACATCACAGGCCCTTCTCTTTTCAGAAGTCCCTTCTTATTTTCCCTATAGCACAGGACAATTTCCCCCAAGACCGGGCTTGTGCCAGTGACTCGATCACACAGGTGCCCAAGTTTAGATCTTTTGTGATGGATCCCAGGTCTCAGAAGCCGGGGTCTGTGTGAGCATCCCCATCCTCAGGACGGCTCCCAACGTTGGCCCTGCAGCTTCCAGAGATGGGGGTGACAGCAGCTGCTGTGCTGGTGGGAATTTTAATTTTTTTAAATTTTAAGTTCTCTTTTGATTTTAATTTTTTAAGAAGTTAAAGTTGTGTATATTTACTGTGTATGACATGATGTTTTGAAACACATATACATGGCAAAATGATGATGGCATTCAGGCTAATTACCCATCCATGACTCCTGGAGGGGATTTTAATGTGAAACTGTCCCAGAAAACCTCCCTGGCTTCTGGAGAAGATGCCTTCTTAGAGAAAGCACATCCTAAGAAAGTCTTCCAGAACTAGAAGTGGACTCTTCTGCCAGCACCTCAACAAGGCTTCCTATCCTTCCCTTTATGCTGGGAGCAGGTGGCAGAGCCTTGGGGACACTTCGTGCCTCCTCCCAGGAAGAGGCTCTGGGCACATTCCTCATCCAGCAGTTTTTCCTGGTGATGCATGGGCCCCTCTGCTGACTCCGGTCTTGGAAGCCGGAGACTGTGTGAGTGCGGGCTCCGGTAACACTCATGGTCCTCAGCTTCTGCTTTCCAGGGCTTGCTTCACCAGGAGGGACTCCATGTTGAATGCGTGGCCTCTCCTTGTGAAAAGCTGCACTTTCGGAAGCTGGTCCACACCAGCCAATGGGGCCGGGACCTCCTGCTGTGATTCTGGGCCTTCTTTCCCAGAGTTCACCTAATTTATCACAAGTTATTTTTGCCTGGAAGCCTGAGAAATCCTTTTACAGTGATAATTTCACTATGGCCACCTCTATCTCTGCAGCCTCCAGGCCTGCCTGGTCATCAAAGCCCACCTCATTGCAGATGGTCACCTAAGCCCACCTCATTGCAGATGGTCAGCTAAGCCCACCTCATTGCAGACCCAAAGCCTCCACCTCATTGCAGACCCAAAGCCTCCACCTCATTGCAGATGGTGAACTTTGTCATGATGCAAATTTTGCCACGTTCCTCTCCTGCCTAAAATCCTACAGTGGTTCTCCACTGCATTAGGTCAACAAATATTTACTGGAGACCATGACTGTTCTAGCCAGCAGGGATACATTGGTGGACAAAGCAGAGAAGCATCCCTGCCTTGTAGAGACGACATTTTCAGGGAAGTCAGACACCAAACAAGGCATAAGAAAACCGCAGGGCGTGTTGGAAGACTCATGTAGTGGGAGGGTGGACCTGGACACGGGAACCCGGAGGCCTAGGGGATGGGCACCGCAGAGTGGAGACCCCCCTGAGAGGTGGCGTTTGGACAAGGACAGAGAGTGAGGGAATGGGCCCATGTGTGTCTGGGGAGATGGCAGGTGAAAACCAAGGTGGCACCCACGTGGCTCCTGGAGGATGTTGAGCCAGGTCAGGGCAGTGAGAGGAGATGTGGTTGGAGGGGAAGCAGGGAGCCAGCCACACAGGGCCTGCACTTGGGATGAGGGGTGTGGCCTCCAGCTCCAGGTCCTGCCATTTTCTTCTCCTTTTTATGTTTCACCATCTTGGCCCTTTAGTTTCTTAAAGGTGAAAAGCCTTCCCAAAGGGGTTCCCACTTCCTGGAATTTTCTTGCTCTCCTGTCTGGCTCACACCCAGCATCCCTTTTTCCTGAAGGCCTTTCCTATCTCCCCCTCAGGGTGGTCCTCCTGCTTTACACAGCCTCAGTCAGGATGCCTCCTTCTCAGCTCTCTATCTGTATGCTAAATAGATGGATGGATGAATGGATGAGTGAACTGATGGATGGGTGGATGGGTGGACAAATGGATGGGTGGACAGGTGGATGGGTGGACGGGGGATGGGTGGATAGAGGACAGGTGGATGGGTGGACGGGTGGATGGGTGAACAGGTGGATGGGTGGACAAATAGATGGGTGGATGGGTGGACAAGTGGACAAATGGATGGGTGGACAGGTAGACAGGTGGACAAATGGATGAGTGGACAGGTGGACAGGTGGGTGAGTGGACAGGTGGACATGAGGGGGGGTGGACAGGTGGACAAATGAATGGGTGGACCAGTGGACAGGTGGACGGGTGGACAGGTGGATGGGTGGGTGGCTGGGTGGACAGGTGGAAAAAATGGATGGGGGGATGGCTGGACAGGTGGATGGGTGGGTGGATGAACAGGTGGACAAATGGGTGGGTGGACAAGTGGATGTGTAGATGGGTGGATGAATGGATAGGTGAACAGGCAGATGAATAGACAGGTGGATGGGCAAATGAATGGGTGGACAGGGGGTTCATTTACTTGATTTCTGCCTTCCTGACTGGACTGGAAGCTCTGTGAGGGGAGGGGCCCTTCTAGTCCACCTCTGCATCTCCAGAGCTTGAAATCGGTGGGCTGATTTCTGCTGATGGACTGACTGGTGCTGTTGATGGCGTGACTCAAGGAACAAAGGTTCTCAGGTTAGTGCTAGGATCCCAGACTGGACAACAGTCGGGTGAACGCTTCCCCAGGGTCAGTGAAGGAGGAAGCATGATAACGTGTGTAAGATCTGTGACTAGTTCTATAGTTCTATAAACTCTACAAAGCTGCTAATTATTATATAACTGGAAAATATCTATAGCACTTATGCTATACCAACAAATTATGTGCATTTCTACAATTGCCACTATAAAGAAATTATATATTAATACCTGCTCCTGGGACTCAATAGTATGATGGCTTTGAAATTAATACAGCAGCACAAATATCTCCTCAGAAAGACCTTTCCTTGCCCTCATCAAAATCGTCCTTCCCACAGTGCCATCTCATTACTGTTTCGCTTTCTCTCTGGCAATTACTCCTGCTGAAAATGACCATATTTACTTCTTTGCTCGTGAGTTCCGGGATGGCCAGTCCGCCTGGCCTGGAGTGCGGCTTCCCAGGTAGACACAGGAAGGAGTCACCTGGATTGCTCCTTCCTGAATTCCATCATTGAGAACGCGTTACCGTGGGTGGGAGTCAGGGACTGACAAAGTCAAGTCTTGCCAGTTTATTTCTAATTTATATAAGTGTCAAGAGCCAACATGAGCAACTGAATTATAGGTCAGAAAAAGATAATATCAAGAAAATATCCCCAAGATTAGTTTTAATGGTGTGAGTGAATAAATTAGTGAGCAGAGTAAAATGAAATTATGGGAAGGGACTGGGCACGGTGGCTCACGCTTGTAATCCTAGCACTGTGGGAAGCTGAGGCAGGAGGATCATTTGAGCCCAGGAGTTTGAGACCAGCCTAGACAGCACAGCAAGATCCCATGTCACAAAAGCAACAATTAAATTAAAAATATAAAAAGAAAAGAAATGATGGAAGGGGCTACGTGGCATTAACTACATATTGTTTCATTCTAAAGAACTTAATACAATCAATGTATACCTATATTTAGGAGACATTTCTCACACTCATGCCGTGTTTCAGTGGACACTCTCTCATGACAAGCTTTAAGAAAAAAAAGTCTCATAATAGCCTGAATGTATCTGTATCCAGCATAAACAGAAAAGGCGGAACAGTGATCAGGTTGTCTCTGAATGAGATAGGGCCTTTCCCAGCTTCTGCATGGACGTGCAGCCCAATATACACCAAATTAAGAAAACAGGAATGTGCCCTGGAGACGCGGGGAACAACACCACCCTCACCCTCACCCCAGAGACGTGGGGAACAAAGCCGCCCTCGCCCTCACCCTCACCCCAGAGACGTGGGGAACAACGCCGCCCTCACCCTCACCCTCACCCTCACGGCAGAGACGCGGGGAACAACACCACCTGCACCCTCATGCCTCAGCTAACCCTAAATTAAGAGCTTGCTGTGGAGACTTCAGAATCATTTCACTGTATACAGATTCAATGCTCAGGGGTTTAAATGGCATTATTTTTTCCACATACTGGACCTTACCTATTAATATTCAGGCCAGGAACAGCTTAAAATTGCAGAGAGCAAGCACACTAGCCAATAGCTCAGTGGGGAGCTGCGGGTAAGTAGCTGCCAGTCACCAGACCCAGGCCATTGTGAGCACAAGGGCCCTCACAGCAGCCCGACGGAGCCCCCGTCACTCGCAGAGCTCTGCAGGCTTGGGGGGCTGTGGCGAGGGAGGGGGAGGCCGGACCCAGCACAGGAAGAGGGGAGGTGAGGCGAGGCCGGGATGCCCTAGGCCACGCCAGCAGCAGGGACAAGCCCAGGGCAGGCAGGAGGCCCCGGAAATGCCCTGGGAAGGTACCACCTCCCTTCTCCTCCCCCCAGACCCCACTGCGGAGACCCAGCTTTCTGGGGACGCAAGCAGGGTGGCGCATCACAGACAGCGTGCTAGGAGAGTCAGCATAGCTGGGCCTGTTTATCCCGCTCCGTGGGCCAGGTGTTCTTGTCAGGGCGGCCGGTGGGCACGTGGGCCGGGCTGGTTGATGTGAGGGTGCGCCAAGCCCGCCTTCTCACCCAGGCATCCCCGACATGGGATCTGCCCAGCCTGCCTGGCAGTTTTCACTGGGAACATATTGTCCCCATCGTCGCTTAACTACGACTGGCGGGACCATGGGGCTCTGCCGGCCCAGCCCTTCCAGTGATGACGATGCTCCAATGGCCGTTCTCCGTGTCAAGCACCGGACGGCCCACCCTGCGACTCCGTCTCTGCGAGGCACACGCCATCTCCCGCCGCTCCCACTAGGCAGGGAGGGCCGAGCTGCTCCGGACGTATCTGCTGCCTGAGCTCCCTTGGGGCATAGTGGCCAAAAACAACCCTACACAGAGGTGAGGTCTTATCACAAAGGATAACCAATACCATATTTTTTCTTATGACAGCAATGACAATGACAGTGTACGTTCTACCCACAATGACAGATGTCAGCTGGGCTGCCACGTCTTAAGCAGATGTCATAAAATCAGAAAAGCATGGAGTGGCTGAAAGGGCGAGGGTGGCAGAGATGCTTGGGGCCTTTCTCTGAGCAAAAGATGTGGCCTCGTCCTGGAGAGGTGGGAGGGGAGGAGGCAGGTGTATGGAAAGCAGCCAACTGGCAAGAACAGGGTGGCTGCAGTCCTGGCCAGCAGATCCCGGCCACCAGGAGACTCTGAGCACAGGGCAGACACCGTGTGCAGGATGCCATCTCTCCTGCTGGTGAACATCCGGAGGACCTCTTGGCCCCCAGGGGCTGCACAGATAGGAAATATGCATAGATCTGAAAGGCTTTGGGACACATGTGAGGGACAGGGTCATCATCTGCTACCACAAGCAACAACAATATTCCTTGCCATTGAGTCGGTCTCTTTCTCTAGAAAGTAAATTCTCAATACGGGAAAGATTCCCTCCAGGGTGTTTACGGATGGTTGTGAGGGGACAGCTTCGGGACTTCTTACAGTTGCTCTAGCCTTTGTCCTTTGATTTCTTCACTTATTATAAATATGTCTTGAAAGCCTCGGGCTGGATGAAGAGAGGGGAGGGAAACACAGTCCCATCCTCACAGGATCCTTTTAGAGTCAGGCAGACAGTGTGGCAGTCAGCAGCCTGAGGTGATCATTTTCGCTGAAATCTGAATTAAAATTTCACTCGATTAAACATGCCTTCTTCATTTTGAGTAGCCACATTTGAAGTACTAAAGACCCACCCGGGGCCCGTGGGTGTGGTATTAACCAGGACGGACATGGAACAGGAATATTTCCACCGTCACAGGACGTTCCATCAGACGGCACGATTCCGAGTGTATGTGTGTTTTCAGCCACCAGGAAAACAGGCAGAGAAACCACCATGCACTGTGGATGCTCCCCCACCCCCCACCCCCAAGGCCCCTATGGACCCTCTTTGGGATCACTCTTTACTGCTATGTCCCAACTGAACACACACCTCAACACCTCCCAAATCCACACACCCACATGCGCAGACACACACGTTGCCACAGGAAAAGCATGATGTGGTTTATGTAAACCACCTTCTCATGGCGTTATACCTCACATGTGACTCTGGGAAAATGCACCTGCACTAACAGGACACAGTGATTCTATCGGGGATGAGATGGCCCGCACGGGCTTGAGGGGTTCGGTGCCATATTCCCCTCCTTCCTCCCCCACCCCTGGTACCATTGGTCCTCTTGCTCTGGGGTTGAGTGGGCATCTATGATGTGGTGTGTCTTGTCCTCCTGGAGGATCTGGGTGTGGTGTCAGTGCTAATGTCCTGGTAAGGATCATGTTCATTCTGGAGCCAGAGGCTTCAGTTCAGATCCTGGGTCATCTACCATCTATGTGACCTTGGAAAACTATTTAGCCTCTGTGAACCTCGGTTTCCTTATCTGCTCATCAGGGCTTGTTATTATTTTTATACACACCCCTTAGAGTTCTGATGAGGATTAAGTGAGCTAATATGTACCAGGCAATAGAAGAGCTCCTGGCAAATAGGAGTCATGGAATGCATTTTACTTATTGCTATTTGGGACAAAGACTCAATCTCATATTTTTTATACTCTTCATGTCGCTTGGCAGTTTTACTGAGTCGATGTCAGATTACTTAAAAATAATTTTTACTTAGCCTTAGATATGTTTTATATTTTTATCTAATTTTGTCTCCAATCTGTGTATTAAACTAGCTACCTCCAGCTACTGTCTCTATGTACCTGCCATGCTTCAAACATCCACACTGGTTTCAAATCTTTCCACATGTTTTTCTCTCTACTTGGAAAGACTTTTCAATCCTTACCTGACTTGCAAACTCCTGTACAAGCCTTAAAGCCCAGTTCTAAAATGACTTCCTTGAGAAAATATCACTGATTACCTAGGGCAGAAGGGATAGCTCCTTCTGGAATATTCCTATACATCTGTTCAAGCTGCTTTTAAATTATGTGCATCTTTAGTATCAATTTACATGCAGTTCTCCCCCTCCACTGGGAATCCCTGAACTAAGAATACTATCCATCCCACCGTGGCCACTCAGGAGATGTTTAGAATGATTGATATTGAATATCGAAGTTCAGAGATGGTGCGGCAGAGACCCATGGGTGGCACTGTCATCAGTGAGGTCTGGGAAAGACCAGAAGGCATTGAGCTCCTTGCTGCTGGGTCTCCCAGCTCCTTCTCTAGCCCTGGATTGTCTGCCCTGCTTTCCCATGCAACATCCCATGCAGTTTGTTCATTTTGTGGCTGTCTGCAGACGTTTAGGGATATGCAGAGGGGGCTTTAAGCCCTCAGCAAGGAAGAGAATATAGGTCCAACTGACAAGGGTCATTTGCTGAAAGTGAAGTTAATAAAAATCGGCCTCAGACAGGAGAGACTGACCCCCTGCAGAAGGAGCTCCCTCCAGGCAAAGCCAAGCTGGTTCATTCCTCCAAGCTTCTGTTGGGCGTTTCTGCCTCAGACACTCTGCTTAGCACTGAGGAGACGCTGGCACTAGGACGCAGCCAGCCTCTGCCCTCAAGGAGCTGACAGTCTGTTTCGGAAATCTCCAAGGGTCCTAACCCTCTATCTGCATTTCTGAGGCCCGGAGGTCCTGAGAACAAAGACCTTGCTGTTCATTCGGTGGCTGGTGATGGGGTGTTGCGTGTCTGGGGTCCGCGCCAGCTGACCACTCACTAGGCAGCAGAACCTCGCTGAACTGTGGAGGCTATTTCTAGTCTATACCCCAGTAAATGTGCACGCCTGACATTTTAACATGGAAATATTGGTGTGTTTGATTTTGAAGGGTCGTTCAGGCCCTGTGCAATATTTGTAGCCAATGTATGCATTCTTCTGAAACCTGACAGATTCTGAACACATCTGCCTATGGGGGTTTTGGCCAAAGCCTGTTGGACTTGGAATCAGGTTAAGTTTTAGGAATATCTATCAAGGACACCAGAGTGTGTCCTGAAACCAGTCAAGATGAGAGAGGTGGGCCGGAAGCGATGGCTCACTCCAGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCAGATTACCTGAGATCAGGAGTTAGCCTGGCCAACATGGTGAAACCTAGTTTCTACTAATAATACAAAAATTAGCCAGGCATGGTGGTGCATGCCTGTAATCCCAGCAACTCAGGAGGCTGAGGCAGGCGAATTGCTTGAACCTGGGAGGTGGTGGTTGCAGTGAGCTGGGATCGTGCCACTGCCCTCTACCCCAGGTGACAAGAGCAAAACTCCATCTCAAAAACAAACAAACAAACAAACAAAACCAACCAACCAACCAAACAAACAAACAAACAAAAAAAGAGAGGCAAGATGGCCCCAGGAAACCAAAGGTCATGGTACCATGTAAATAACACAACCACCTGAAGATGGCTGCAGCCCAAGGGACTGTGTTTTCAGACACCATGGCTGCGAGAAGAACAGAGTGGGACAGGAGGGAGACACCACAGCACCCACTCCCCTCCGGGTACCCACTCCCCTCTGGGTACCCACTCCTCTCCGGGCACCCACTCCCCTCCAGGCACCCACTCCCCTCCGGGTACACACTCCTCTCCAGGCACCCACTCCCCTCCGGGCACCCACTCCCCTCAGGGCACCCACTCCCCTCTGGGTACCCACTCCCCTCCGGGTACCCACCTCTCTCCGGGCACCCACTCCCCTCCGGGCACCCACTCCTCTCCAGGCACCCACTCCCCTCAGGGCACCCACTCCCCTCCGGGCACCCACTCCCCTCCAGGACGCTCCAGCGTCTGGCTTCTGGACGTGTCCACTGCTGAGTGTACACAGGCCTCAGCTCCCACCTGGGCAAACATCGCCTGGGCAGTCGTCCCCTGTGCCAGTCCCAGGACCCAGGGCCCTGTGTGCTGCTCCTCACAGGCGACCTTCTGCCTACCGCCTGTGAACAGCCAAACCAGCTGGCTGGAGGCTGGGAGAACAGGGCCCCGAGGCTGAGTCAGCCTGGGGTCCCAGCCAAGATGCAGATGCGGAGAGACCCAGGCCCCCCGCAGCTGACCAGACACGTGAGAGGGGCAGCCGGGCCCAGCGGACCCTGAGCCCATCCCAGGCCACACTGCCCAGGCACAGAGCGTGGAGCTACATAAACAGGCGTTGCTTTAAGCCCCTAAGGTGTGGAGCAGCAGTGCAGTTGGAGGCACCCTGTGTGTGCTCACAGATACAGGCGGAATCAGGCAAGGGCTGCTGGGAAAGAACGGCAGGGCCACATCGGCCTCTGCGGGACAAGGACACCGGCTCCCGATGCCTGAAAGTGCCTGCACCAGCCTCACCGTGCACTCTGCCTCCAAGAGCAGAGAGTGTCTCGCAACCACATCGCTTCCTGGCTACGCCGTTCTGCAGGCTGAAATGGCTTCCATTCACCCAAGCACAATTCCTGGAGAATCCTGAGACACACGAGGCTCACGTTTTCTCTATGTATCTAATTACCAGGAATAATGAGGCAGGGAAACCTGAACGGTTGTGAATTATCCCACAAGAAGACGTCCACGGGCAGAGGCCACCTGTCGCAGGGGAAGGCAGGCAGCTGTCCCTGGGAATGACACACAGCCCACCTTCTTTCCCTCGGCTCCTCGGTGTGTTAATCTGATGTGTCTGTTTCCCTCTAAAGGTTTTGTTCTTTTCACACTGCAGATGGATGTGCAATATGCCGCTTTTGCACTAGAGGCAAGAGAATCAGGTGGAATCTCACAGCACTTCTCCCGGACTCCTGGGCCGTCTGCACCACGTCCAAGTCAAGGGCCCTGGACTGAGGCACATGCCCACTTCCTGCGTCTTTGCGATAAAATGAGTGTGCGGTTCACACTCACTTCCTGCATCCCTGAGGTGAGGCTGTGGTGGTGAGGCCGTGGTGGTGAGGCCGTGTGGTTGAGGCCGTGGGGGTGAGGCCGTGGGGTGAGGCCATGGGGTTGAGGCTGTGGGGTGAGGCCGG
READ_BASE_COUNTS: 6282, 6408, 6286, 6163, 0
READ_FILTER: SRA_READ_FILTER_PASS
READ_LEN: 25139
READ_START: 0
READ_TYPE: SRA_READ_TYPE_BIOLOGICAL
REPLACED_BY:
REPLACES:
SEQID_GNL_PREFIX: WGS:JTFH01
SEQ_ID: gi|725026265|gb|JTFH01000001.1|
SEQ_ID_GNL: gnl|WGS:JTFH01|decoy00001
SPOT_COUNT: 1998
SPOT_GROUP:
SPOT_ID: 1
SPOT_LEN: 25139
STRAIN:
TARGETED_LOCUS_ID:
TARGETED_LOCUS_NAME:
TAXID: 9606
TITLE: Homo sapiens isolate Pool of 254 public SGDP samples decoy00001, whole genome shotgun sequence
TRIM_LEN: 25139
TRIM_START: 0
Run vdb-config -i
;
Uncheck "Enable remote access", if it is enabled (type 'r');
type 's' to save;
type 'x' to exit.
Then run again align-info path/SRR22287940
and post here the output.
JTFH01000001,chrUn_JTFH01000001v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000002,chrUn_JTFH01000002v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000003,chrUn_JTFH01000003v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000004,chrUn_JTFH01000004v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000007,chrUn_JTFH01000007v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000008,chrUn_JTFH01000008v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000012,chrUn_JTFH01000012v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000013,chrUn_JTFH01000013v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000015,chrUn_JTFH01000015v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000017,chrUn_JTFH01000017v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000018,chrUn_JTFH01000018v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000022,chrUn_JTFH01000022v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000025,chrUn_JTFH01000025v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000026,chrUn_JTFH01000026v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000029,chrUn_JTFH01000029v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000031,chrUn_JTFH01000031v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000033,chrUn_JTFH01000033v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000039,chrUn_JTFH01000039v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000040,chrUn_JTFH01000040v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000044,chrUn_JTFH01000044v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000045,chrUn_JTFH01000045v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000050,chrUn_JTFH01000050v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000054,chrUn_JTFH01000054v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000059,chrUn_JTFH01000059v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000060,chrUn_JTFH01000060v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000061,chrUn_JTFH01000061v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000063,chrUn_JTFH01000063v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000064,chrUn_JTFH01000064v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000068,chrUn_JTFH01000068v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000070,chrUn_JTFH01000070v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000071,chrUn_JTFH01000071v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000072,chrUn_JTFH01000072v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000077,chrUn_JTFH01000077v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000079,chrUn_JTFH01000079v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000087,chrUn_JTFH01000087v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000089,chrUn_JTFH01000089v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000090,chrUn_JTFH01000090v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000092,chrUn_JTFH01000092v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000096,chrUn_JTFH01000096v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000098,chrUn_JTFH01000098v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000101,chrUn_JTFH01000101v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000107,chrUn_JTFH01000107v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000108,chrUn_JTFH01000108v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000110,chrUn_JTFH01000110v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000111,chrUn_JTFH01000111v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000112,chrUn_JTFH01000112v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000113,chrUn_JTFH01000113v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000114,chrUn_JTFH01000114v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000116,chrUn_JTFH01000116v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000117,chrUn_JTFH01000117v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000118,chrUn_JTFH01000118v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000119,chrUn_JTFH01000119v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000123,chrUn_JTFH01000123v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000124,chrUn_JTFH01000124v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000126,chrUn_JTFH01000126v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000127,chrUn_JTFH01000127v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000129,chrUn_JTFH01000129v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000130,chrUn_JTFH01000130v1_decoy,false,remote:path/SRR22287940/JTFH01
JTFH01000132,chrUn_JTFH01000132v1_decoy,false,remote:path/SRR22287940/JTFH01
Try to run fasterq-dump or fastq-dump of /cluster/projects/hopegroup/dbGap/prj_35579/SRR22287940 again. Does it fail now?
Still fails with fasterq-dump.
2024-07-13T18:58:29 fasterq-dump.3.1.1 warn: directory not found while opening manager within virtual file system module - can't open JTFH01000001 as a RefSeq or as a WGS
2024-07-13T18:58:29 fasterq-dump.3.1.1 err: sorter.c producer_thread_func: rec.read.len = 0
2024-07-13T18:58:30 fasterq-dump.3.1.1 err: sorter.c run_producer_pool().join_and_release_threads -> RC(rcVDB,rcNoTarg,rcWriting,rcFormat,rcNull)
2024-07-13T18:58:30 fasterq-dump.3.1.1 err: sorter.c execute_lookup_production() -> RC(rcVDB,rcNoTarg,rcWriting,rcFormat,rcNull)
2024-07-13T18:58:30 fasterq-dump.3.1.1 err: fasterq-dump.c produce_lookup_files() -> RC(rcVDB,rcNoTarg,rcWriting,rcFormat,rcNull)
=============================================================
An error occurred during processing.
A report was generated into the file 'usr/ncbi_error_report.txt'.
If the problem persists, you may consider sending the file
to 'sra-tools@ncbi.nlm.nih.gov' for assistance.
=============================================================
fasterq-dump quit with error code 3
I will need to debug it on Monday.
What ngc file did you use to prefetch SRR22287940?
The ngc file was downloaded from the dbGap repository that is specific to our groups data request application. It was the same file used to download the other accessions. I am not sure if I can share the file.
Don't share it. What is project's number?
project # 35579
How many files do you have in SRR22287940/ directory?
There are 592 files in total.
What is the output of the following?
align-info /cluster/projects/hopegroup/dbGap/prj_35579/SRR22287940 | wc -l
I get 1552 back.
What is the output of the following?
ls -l /cluster/projects/hopegroup/dbGap/prj_35579/SRR22287940/SRR22287940*
-rw-r----- 1 usr gdc 1278275591 Jul 8 16:05 SRR22287940/SRR22287940.sra
It is a bug, thank you for finding it, we will fix it in our following release.
Currently run fasterq-dump
from the same directory where run directory SRR22287940/
is located (/cluster/projects/hopegroup/dbGap/prj_35579
).
Use --outdir
argument to specify directory where to write output files.
Awesome, thank you!
I am currently running sratoolkit 3.1.1 and have run into the following error:
fasterq-dump:
fasterq-dump --split-files path/SRR22287940 -e 6 --outdir test
2024-07-13T01:17:07 fasterq-dump.3.1.1 warn: directory not found while opening manager within virtual file system module - can't open JTFH01000001 as a RefSeq or as a $2024-07-13T01:17:07 fasterq-dump.3.1.1 err: sorter.c producer_thread_func: rec.read.len = 0 2024-07-13T01:17:08 fasterq-dump.3.1.1 err: sorter.c run_producer_pool().join_and_release_threads -> RC(rcVDB,rcNoTarg,rcWriting,rcFormat,rcNull) 2024-07-13T01:17:08 fasterq-dump.3.1.1 err: sorter.c execute_lookup_production() -> RC(rcVDB,rcNoTarg,rcWriting,rcFormat,rcNull) 2024-07-13T01:17:08 fasterq-dump.3.1.1 err: fasterq-dump.c produce_lookup_files() -> RC(rcVDB,rcNoTarg,rcWriting,rcFormat,rcNull)
fastq-dump:
fastq-dump --gzip --skip-technical --split-files path/SRR22287940
2024-07-13T01:42:02 fastq-dump.3.1.1 warn: timeout exhausted while creating file within network system module - can't open JTFH01000001 as a RefSeq or as a WGS 2024-07-13T01:45:03 fastq-dump.3.1.1 warn: timeout exhausted while creating file within network system module - can't open JTFH01000013 as a RefSeq or as a WGS 2024-07-13T01:48:05 fastq-dump.3.1.1 warn: timeout exhausted while creating file within network system module - can't open JTFH01000015 as a RefSeq or as a WGS 2024-07-13T01:51:06 fastq-dump.3.1.1 warn: timeout exhausted while creating file within network system module - can't open JTFH01000017 as a RefSeq or as a WGS 2024-07-13T01:54:08 fastq-dump.3.1.1 warn: timeout exhausted while creating file within network system module - can't open JTFH01000018 as a RefSeq or as a WGS 2024-07-13T01:57:10 fastq-dump.3.1.1 warn: timeout exhausted while creating file within network system module - can't open JTFH01000022 as a RefSeq or as a WGS etc....
This error occurs in only a subset of the SRA accessions, specially WGS samples. The accessions were downloaded using prefetch and are unfortunately restricted as they are samples from a clinical study. As you can see from the files within the accession folder, the JTFH01 reference files are located within the folder so I am not sure why it is trying to download/create the files again. Also, our compute cluster is restricted from the internet so attempts to fetch any reference files via fastq-dump/fasterq-dump is denied.
JTFH01 KN707668.1 KN707750.1 KN707845.1 KN707912.1 NC_000005.10 NT_167218.1 NT_187387.1 NT_187443.1 NT_187508.1 NT_187545.1 NT_187582.1 NT_187619.1 NT_187656.1 NT_187693.1 NW_003315958.1 KN707607.1 KN707669.1 KN707753.1 KN707850.1 KN707913.1 NC_000006.12 NT_167219.1 NT_187388.1 NT_187444.1 NT_187509.1 NT_187546.1 NT_187583.1 ... NW_004166862.2 KN707661.1 KN707744.1 KN707835.1 KN707904.1 NC_000002.12 NT_167213.1 NT_187384.1 NT_187438.1 NT_187505.1 NT_187542.1 NT_187579.1 NT_187616.1 NT_187653.1 NT_187690.1 NW_003315955.1 NW_004504305.1 KN707662.1 KN707746.1 KN707840.1 KN707905.1 NC_000003.12 NT_167214.1 NT_187385.1 NT_187439.1 NT_187506.1 NT_187543.1 NT_187580.1 NT_187617.1 NT_187654.1 NT_187691.1 NW_003315956.1 SRR22287940.sra KN707664.1 KN707749.1 KN707844.1 KN707906.1 NC_000004.12 NT_167215.1 NT_187386.1 NT_187442.1 NT_187507.1 NT_187544.1 NT_187581.1 NT_187618.1 NT_187655.1 NT_187692.1 NW_003315957.1
I have been stuck on this problem for days now and can't find any resources to help with this issue. So, any help is much appreciated.
Thank you.