ncbi / sra-tools

SRA Tools
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ngs-sdk package not found during configure #965

Open dgodin19 opened 2 weeks ago

dgodin19 commented 2 weeks ago

I am trying to install sra-tools. I have downloaded SRA-tools and NCBI-VDB tarballs and then extracted the tarballs. The versions that I have for both are 3.1.1.

I was able to configure and make NCBI-VDB, but was unable to configure SRA-tools.

When I try to do:

./configure --with-ngs-sdk-prefix=../ncbi-vdb-3.1.1 while in the sra-tools directory, I get the error:

Unknown option: with-ngs-sdk-prefix
configure: error at konfigure.perl line 110.

And I am unable to configure sra-tools. Any tips?

klymenko commented 1 week ago

Remove --with-ngs-sdk-prefix option.