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404 error using prefetch #975

Closed bchesnut closed 3 weeks ago

bchesnut commented 3 weeks ago

We are trying to use prefetch to download data. Command is:

$ ./sratoolkit.3.1.1-centos_linux64/bin/prefetch -vvv --ngc prj_20495_D27416.ngc SRR9228789

Message returned is:

2024-10-09T16:55:53 prefetch.3.1.1 err: name not found while resolving query within virtual file system module - failed to resolve accession 'SRR9228789' - no data ( 404 ); ncbi_phid=939B42862BB23DC500003DAF24B8D5B3.1.m_2 2024-10-09T16:55:53 prefetch.3.1.1: Current preference is set to retrieve SRA Normalized Format files with full base quality scores 2024-10-09T16:55:53 prefetch.3.1.1: 1) Failed to resolve 'SRR9228789'...

We are wondering if the dataset for SRR9228789 has been archived off to cold storage. The dataset was generated in 2020.

Thank you.

klymenko commented 3 weeks ago

Email this question to sra@ncbi.nlm.nih.gov.

bchesnut commented 3 weeks ago

Done. Closing issue.