ncbo / bioportal-project

Serves to consolidate (in Zenhub) all public issues in BioPortal
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purge Base graph in the triple store #285

Open alexskr opened 8 months ago

alexskr commented 8 months ago

BioPortal triple store contains data.bioontology.org/metadata/Base graph and appears to be part of the Notes/PoposalNewClass functionality. It doesn't seem to contain any useful data so I propose to purge it.

<http://data.bioontology.org/bases/7eb1d760-18c2-0131-3321-406c8f5a5324> <http://data.bioontology.org/metadata/type> <http://data.bioontology.org/details/ProposalNewClass> ;
  <http://data.bioontology.org/metadata/contactInfo> 1 ;
  <http://data.bioontology.org/metadata/label> "New_Term_Name" ;
  <http://data.bioontology.org/metadata/classId> "http://purl.bioontology.org/ontology/provisional/0b3d5dba-4409-489a-9121-177a3a594773" ;
  <http://data.bioontology.org/metadata/definition> 3 ;
  <http://data.bioontology.org/metadata/reasonForChange> "Author: [John Doe] 2" ;
  <http://data.bioontology.org/metadata/synonym> "4" ;
  rdf:type <http://data.bioontology.org/metadata/Base> .
<http://data.bioontology.org/bases/87f73020-18c2-0131-3321-406c8f5a5324> <http://data.bioontology.org/metadata/type> <http://data.bioontology.org/details/ProposalNewClass> ;
  <http://data.bioontology.org/metadata/label> "testNewPreferredName" ;
  <http://data.bioontology.org/metadata/definition> "testNewTermDefinition" ;
  <http://data.bioontology.org/metadata/reasonForChange> "testReason" ;
  rdf:type <http://data.bioontology.org/metadata/Base> .
<http://data.bioontology.org/bases/89d298d0-18c2-0131-3321-406c8f5a5324> <http://data.bioontology.org/metadata/type> <http://data.bioontology.org/details/ProposalNewClass> ;
  <http://data.bioontology.org/metadata/contactInfo> "REDACTED" ;
  <http://data.bioontology.org/metadata/label> "Mid-level provider" ;
  <http://data.bioontology.org/metadata/classId> "http://purl.bioontology.org/ontology/provisional/db8e7990-ebb8-4cc0-b883-dbb92d89ee11" ;
  <http://data.bioontology.org/metadata/definition> "personnel type:  Mid-level provider" ;
  <http://data.bioontology.org/metadata/reasonForChange> "Author- REDACTED Missing terms" ;
  <http://data.bioontology.org/metadata/synonym> "[\"Radiologic Assistant\", \"Nurse practitioner\", \"Physician assistant\"]" ;
  rdf:type <http://data.bioontology.org/metadata/Base> .
<http://data.bioontology.org/bases/9da6af70-18c2-0131-3321-406c8f5a5324> <http://data.bioontology.org/metadata/type> <http://data.bioontology.org/details/ProposalNewClass> ;
  <http://data.bioontology.org/metadata/contactInfo> "" ;
  <http://data.bioontology.org/metadata/label> "TestTerm" ;
  <http://data.bioontology.org/metadata/classId> "http://purl.bioontology.org/ontology/provisional/477dfec7-f61f-4010-af99-70fe4dd7df48" ;
  <http://data.bioontology.org/metadata/definition> "Term for testing ..." ;
  <http://data.bioontology.org/metadata/reasonForChange> "No reason for change........" ;
  rdf:type <http://data.bioontology.org/metadata/Base> .
<http://data.bioontology.org/bases/cdd29170-da48-0132-29b0-005056010073> <http://data.bioontology.org/metadata/newValue> "HI" ;
  <http://data.bioontology.org/metadata/type> <http://data.bioontology.org/details/ProposalChangeProperty> ;
  <http://data.bioontology.org/metadata/propertyId> "OBI:0000875" ;
  <http://data.bioontology.org/metadata/reasonForChange> "Not reflective of what the scientific community uses" ;
  <http://data.bioontology.org/metadata/oldValue> "HAI" ;
  rdf:type <http://data.bioontology.org/metadata/Base> .

http://purl.bioontology.org/ontology/provisional/* redirects to http://bioportal.bioontology.org/virtual/1020provisional/* which is no longer valid