ncbo / ncbo_cron

Jobs that run on a regular basis in the NCBO infrastructure
Other
2 stars 6 forks source link

Add script to detect OBO Library ontologies missing from BioPortal #9

Closed jvendetti closed 6 years ago

jvendetti commented 7 years ago

We would like to ensure that all ontologies in the OBO Library are also available in BioPortal.

Add a script (executed nightly?) that programmatically detects OBO Library ontologies missing from BioPortal. The OBO Foundry provides a master list of their ontologies in several formats, e.g., "ontologies.jsonld". If missing ontologies are detected, notify BioPortal team members via email.