Closed syphax-bouazzouni closed 1 year ago
FYI @jvendetti , @graybeal
Thanks very much for the contribution Syphax. It appears the unit test checks failed due to an issue with the version of ncbo-annotator in the Gemfile.lock:
Step 12/15 : RUN bundle install
---> Running in 4ca4c53b2e85
Bundler 2.3.26 is running, but your lockfile was generated with 2.3.11. Installing Bundler 2.3.11 and restarting using that version.
Fetching gem metadata from [https://rubygems.org/.](https://rubygems.org/)
Fetching bundler 2.3.11
Installing bundler 2.3.11
Fetching https://github.com/palexander/shotgun.git
Fetching https://github.com/ncbo/sparql-client.git
Fetching https://github.com/ncbo/ontologies_linked_data.git
Fetching https://github.com/ncbo/ncbo_ontology_recommender.git
Fetching https://github.com/ncbo/ncbo_cron.git
Fetching https://github.com/ncbo/ncbo_annotator.git
fatal: Could not parse object '57204d8e54432ba660af4c49806e2a3019a23fa2'.```
Thanks very much for the contribution Syphax. It appears the unit test checks failed due to an issue with the version of ncbo-annotator in the Gemfile.lock:
Step 12/15 : RUN bundle install ---> Running in 4ca4c53b2e85 Bundler 2.3.26 is running, but your lockfile was generated with 2.3.11. Installing Bundler 2.3.11 and restarting using that version. Fetching gem metadata from [https://rubygems.org/.](https://rubygems.org/) Fetching bundler 2.3.11 Installing bundler 2.3.11 Fetching https://github.com/palexander/shotgun.git Fetching https://github.com/ncbo/sparql-client.git Fetching https://github.com/ncbo/ontologies_linked_data.git Fetching https://github.com/ncbo/ncbo_ontology_recommender.git Fetching https://github.com/ncbo/ncbo_cron.git Fetching https://github.com/ncbo/ncbo_annotator.git fatal: Could not parse object '57204d8e54432ba660af4c49806e2a3019a23fa2'.```
Fixed (I hope)
Merging #107 (13df5ce) into master (64742d1) will not change coverage. The diff coverage is
n/a
.
@@ Coverage Diff @@
## master #107 +/- ##
=======================================
Coverage 71.83% 71.83%
=======================================
Files 52 52
Lines 2844 2844
=======================================
Hits 2043 2043
Misses 801 801
Flag | Coverage Δ | |
---|---|---|
unittests | 71.83% <ø> (ø) |
Flags with carried forward coverage won't be shown. Click here to find out more.
Help us with your feedback. Take ten seconds to tell us how you rate us. Have a feature suggestion? Share it here.
The issue
And message on the support mailing list
The cause
We had this same issue same time ago at Agroportal, so the problem was on the depnedecy haml (that parse our docs) that had a break change after the version 5.2.2, so the solution was to lock the version to 5.2.2 and not use the latest