potentially broken visualization of percentVJ on docsite

ncborcherding / scRepertoire

A toolkit for single-cell immune profiling

https://www.borch.dev/uploads/screpertoire/

MIT License

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potentially broken visualization of percentVJ on docsite #422

Closed Qile0317 closed 1 month ago

Qile0317 commented 1 month ago

On the documentation site this is what I currently see:

The visualization looks like it's probably wrong? This also may be a problem with the rest of the vignette
The docsite says it is based on scRepertoire 2.0.5 - is this intended?
I haven't tested this personally yet - just something I spotted just now.

ncborcherding commented 1 month ago

This this is a product of the limited graphing size of the markdown. It does plot correctly.

Deploying v2.0.8 website today.

When you have your fixes/improvements, we will bump versions and get it in bioconductor.

Qile0317 commented 1 month ago

This this is a product of the limited graphing size of the markdown. It does plot correctly.

Deploying v2.0.8 website today.

When you have your fixes/improvements, we will bump versions and get it in bioconductor.

I see, thanks! A future workaround might involve some semi manual trial and error based rescaling of the output