Update process PLASMIDCHECK

ncezid-narst / stylo

Nanopore assembly workflow from basecalled reads to polished assembly plus assembly QC, metrics, and plasmid replicon detection

MIT License

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Closed kimyoungw closed 1 year ago

kimyoungw commented 1 year ago

Update db update command to include resfinder, pointfinder, plasmidfinder commits in .nf
Add staramr_resfinder_commit, staramr_pointfinder_commit, staramr_plasmidfinder_commit parameters to .config