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ncihtan / data-models

Schema.org Data Models for HTAN
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Validate Genomic Reference #160

Closed clarisse-lau closed 1 year ago

clarisse-lau commented 1 year ago

Attribute to Validate

Specify the attribute that you would like validation rule to apply to Attribute: Genomic Reference

How important is this validation? Select from the options below:

• Low

When will use cases depending on this become relevant? Select from the options below:

• Short-term - 2-4 weeks

Additional context Currently Genomic Reference is a free text field. Due to this, some downstream actions (including preparing metadata for submission to CDS) require mapping a range of uncontrolled submitted values to a harmonized set. Consider validating this field in the HTAN data model.

aclayton555 commented 1 year ago

Work on this in parallel with: https://github.com/ncihtan/data-models/issues/180

brynnz22 commented 1 year ago

Work in parallel with #177

adamjtaylor commented 1 year ago

@clarisse-lau do you have a set of valid values that we need for this field?

adamjtaylor commented 1 year ago

Example queries for previously entered values suggest that this would be a pretty large lift to harmonise existing submissions

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aclayton555 commented 1 year ago

carry forward into next sprint. to be informed by valid values typically requested by CDS.

clarisse-lau commented 1 year ago

I've added this for discussion in next week's CRDC coord call

aclayton555 commented 1 year ago

Discussed on 2023.04.06 CRDC Coordination call: