Discussed by Matt and Erik on dcc-uploads-washu Slack
Erik Storrs (estorrs@wustl.edu) and Matt (m.wyczalkowski@wustl.edu) have single cell data, for Aadel_PDAC , with sample index reads (I1 instead of R1 or R2), but in the level 2 metadata the only options for the Read Indicator column are R1, R2, or R1&R2.
How important is this feature?
🌗 Medium - can do work without it; but it's important (e.g. to save time or for convenience)
When will use cases depending on this become relevant?
Short-term - 2-4 weeks
Implementation checklist
[ ] Branch created
[ ] HTAN.model.csv editied and pushed
[ ] HTAN.model.jsonld validated and created by Github action
[ ] PR opened
[ ] PR approved
[ ] PR merged into main
[ ] New Component added to ncihtan/HTAN-data-curator (if required)
Information
Proposed change:
Add
I1
andOther
as valid values forRead Indicator
When complete, close out this ticket: https://sagebionetworks.jira.com/browse/HTAN-252
Dicussion link:
Discussed by Matt and Erik on dcc-uploads-washu Slack
Erik Storrs (estorrs@wustl.edu) and Matt (m.wyczalkowski@wustl.edu) have single cell data, for Aadel_PDAC , with sample index reads (I1 instead of R1 or R2), but in the level 2 metadata the only options for the Read Indicator column are R1, R2, or R1&R2.
How important is this feature?
When will use cases depending on this become relevant?
Implementation checklist
HTAN.model.csv
editied and pushedHTAN.model.jsonld
validated and created by Github actionmain
ncihtan/HTAN-data-curator
(if required)