ncihtan / htan-portal

The HTAN Data Portal
https://humantumoratlas.org
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Add CelloType to Tools list #689

Closed onursumer closed 3 weeks ago

onursumer commented 1 month ago

Name CelloType Atlas HTAN CHOP Type Suite Assay Imaging Publication https://www.biorxiv.org/content/10.1101/2024.09.15.613139v1.full PMID https://pubmed.ncbi.nlm.nih.gov/39345491/ Homepage https://github.com/tanlabcode/CelloType Description CelloType is an end-to-end Transformer-based method for automated cell/nucleus segmentation and cell type classification Operation NA Input Data Imaging Output Data Annotations Language Python

Image: https://github.com/tanlabcode/CelloType/blob/main/figures/codex_example.png?raw=true