ncsu-landscape-dynamics / rpops

PoPS (Pest or Pathogen Spread) R Package
https://ncsu-landscape-dynamics.github.io/rpops/
GNU General Public License v3.0
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Host and intitial condition uncertainty #151

Closed ChrisJones687 closed 1 year ago

codecov[bot] commented 1 year ago

Codecov Report

Base: 84.65% // Head: 85.11% // Increases project coverage by +0.46% :tada:

Coverage data is based on head (e9ae872) compared to base (8a2f00a). Patch coverage: 87.79% of modified lines in pull request are covered.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #151 +/- ## ========================================== + Coverage 84.65% 85.11% +0.46% ========================================== Files 46 46 Lines 5025 5248 +223 ========================================== + Hits 4254 4467 +213 - Misses 771 781 +10 ``` | [Impacted Files](https://codecov.io/gh/ncsu-landscape-dynamics/rpops/pull/151?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=ncsu-landscape-dynamics) | Coverage Δ | | |---|---|---| | [R/calibrate.R](https://codecov.io/gh/ncsu-landscape-dynamics/rpops/pull/151/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=ncsu-landscape-dynamics#diff-Ui9jYWxpYnJhdGUuUg==) | `84.37% <75.16%> (+1.74%)` | :arrow_up: | | [R/pops\_multirun.R](https://codecov.io/gh/ncsu-landscape-dynamics/rpops/pull/151/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=ncsu-landscape-dynamics#diff-Ui9wb3BzX211bHRpcnVuLlI=) | `90.59% <88.46%> (-0.15%)` | :arrow_down: | | [R/validate.R](https://codecov.io/gh/ncsu-landscape-dynamics/rpops/pull/151/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=ncsu-landscape-dynamics#diff-Ui92YWxpZGF0ZS5S) | `98.84% <89.65%> (-1.16%)` | :arrow_down: | | [R/configuration.R](https://codecov.io/gh/ncsu-landscape-dynamics/rpops/pull/151/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=ncsu-landscape-dynamics#diff-Ui9jb25maWd1cmF0aW9uLlI=) | `92.29% <95.23%> (-0.40%)` | :arrow_down: | | [R/helpers.R](https://codecov.io/gh/ncsu-landscape-dynamics/rpops/pull/151/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=ncsu-landscape-dynamics#diff-Ui9oZWxwZXJzLlI=) | `77.70% <100.00%> (+2.97%)` | :arrow_up: | | [R/pops.r](https://codecov.io/gh/ncsu-landscape-dynamics/rpops/pull/151/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=ncsu-landscape-dynamics#diff-Ui9wb3BzLnI=) | `100.00% <100.00%> (ø)` | | | [inst/include/utils.hpp](https://codecov.io/gh/ncsu-landscape-dynamics/rpops/pull/151/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=ncsu-landscape-dynamics#diff-aW5zdC9pbmNsdWRlL3V0aWxzLmhwcA==) | `51.66% <0.00%> (-10.00%)` | :arrow_down: | | [inst/include/network.hpp](https://codecov.io/gh/ncsu-landscape-dynamics/rpops/pull/151/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=ncsu-landscape-dynamics#diff-aW5zdC9pbmNsdWRlL25ldHdvcmsuaHBw) | `62.33% <0.00%> (-2.60%)` | :arrow_down: | | [inst/include/simulation.hpp](https://codecov.io/gh/ncsu-landscape-dynamics/rpops/pull/151/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=ncsu-landscape-dynamics#diff-aW5zdC9pbmNsdWRlL3NpbXVsYXRpb24uaHBw) | `88.62% <0.00%> (+1.96%)` | :arrow_up: | | ... and [2 more](https://codecov.io/gh/ncsu-landscape-dynamics/rpops/pull/151/diff?src=pr&el=tree-more&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=ncsu-landscape-dynamics) | | Help us with your feedback. Take ten seconds to tell us [how you rate us](https://about.codecov.io/nps?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=ncsu-landscape-dynamics). Have a feature suggestion? [Share it here.](https://app.codecov.io/gh/feedback/?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=ncsu-landscape-dynamics)

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