Refactor

[codecov[bot]]

Codecov Report

Patch coverage: 65.49% and project coverage change: -3.32% :warning:

Comparison is base (21e0f5f) 85.48% compared to head (231088b) 82.17%. Report is 1 commits behind head on main.

:exclamation: Current head 231088b differs from pull request most recent head e3698a1. Consider uploading reports for the commit e3698a1 to get more accurate results

Additional details and impacted files

```diff @@ Coverage Diff @@ ## main #173 +/- ## ========================================== - Coverage 85.48% 82.17% -3.32% ========================================== Files 46 51 +5 Lines 5396 5560 +164 ========================================== - Hits 4613 4569 -44 - Misses 783 991 +208 ``` | [Files Changed](https://app.codecov.io/gh/ncsu-landscape-dynamics/rpops/pull/173?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=ncsu-landscape-dynamics) | Coverage Δ | | |---|---|---| | [R/quantity\_allocation\_disagreement.R](https://app.codecov.io/gh/ncsu-landscape-dynamics/rpops/pull/173?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=ncsu-landscape-dynamics#diff-Ui9xdWFudGl0eV9hbGxvY2F0aW9uX2Rpc2FncmVlbWVudC5S) | `87.84% <0.00%> (-3.22%)` | :arrow_down: | | [inst/include/PoPS\_RcppExports.h](https://app.codecov.io/gh/ncsu-landscape-dynamics/rpops/pull/173?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=ncsu-landscape-dynamics#diff-aW5zdC9pbmNsdWRlL1BvUFNfUmNwcEV4cG9ydHMuaA==) | `0.00% <ø> (ø)` | | | [inst/include/date.hpp](https://app.codecov.io/gh/ncsu-landscape-dynamics/rpops/pull/173?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=ncsu-landscape-dynamics#diff-aW5zdC9pbmNsdWRlL2RhdGUuaHBw) | `88.65% <0.00%> (-0.64%)` | :arrow_down: | | [...lude/normal\_distribution\_with\_uniform\_fallback.hpp](https://app.codecov.io/gh/ncsu-landscape-dynamics/rpops/pull/173?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=ncsu-landscape-dynamics#diff-aW5zdC9pbmNsdWRlL25vcm1hbF9kaXN0cmlidXRpb25fd2l0aF91bmlmb3JtX2ZhbGxiYWNrLmhwcA==) | `0.00% <0.00%> (ø)` | | | [inst/include/soils.hpp](https://app.codecov.io/gh/ncsu-landscape-dynamics/rpops/pull/173?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=ncsu-landscape-dynamics#diff-aW5zdC9pbmNsdWRlL3NvaWxzLmhwcA==) | `0.00% <0.00%> (ø)` | | | [inst/include/environment.hpp](https://app.codecov.io/gh/ncsu-landscape-dynamics/rpops/pull/173?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=ncsu-landscape-dynamics#diff-aW5zdC9pbmNsdWRlL2Vudmlyb25tZW50LmhwcA==) | `32.25% <32.25%> (ø)` | | | [inst/include/generator\_provider.hpp](https://app.codecov.io/gh/ncsu-landscape-dynamics/rpops/pull/173?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=ncsu-landscape-dynamics#diff-aW5zdC9pbmNsdWRlL2dlbmVyYXRvcl9wcm92aWRlci5ocHA=) | `34.82% <34.82%> (ø)` | | | [R/configuration.R](https://app.codecov.io/gh/ncsu-landscape-dynamics/rpops/pull/173?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=ncsu-landscape-dynamics#diff-Ui9jb25maWd1cmF0aW9uLlI=) | `80.63% <46.08%> (-11.47%)` | :arrow_down: | | [inst/include/config.hpp](https://app.codecov.io/gh/ncsu-landscape-dynamics/rpops/pull/173?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=ncsu-landscape-dynamics#diff-aW5zdC9pbmNsdWRlL2NvbmZpZy5ocHA=) | `65.51% <60.00%> (-0.53%)` | :arrow_down: | | [inst/include/quarantine.hpp](https://app.codecov.io/gh/ncsu-landscape-dynamics/rpops/pull/173?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=ncsu-landscape-dynamics#diff-aW5zdC9pbmNsdWRlL3F1YXJhbnRpbmUuaHBw) | `74.19% <71.42%> (-7.06%)` | :arrow_down: | | ... and [14 more](https://app.codecov.io/gh/ncsu-landscape-dynamics/rpops/pull/173?src=pr&el=tree-more&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=ncsu-landscape-dynamics) | |

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[ChrisJones687]

Fixes #170, Fixes #158, and Fixes #135.

[ChrisJones687]

Closes #176