Downloading the genome of organism 'oryza_sativa' from Ensembl!
230 Login successful.
FTP Error = 550 Failed to change directory.
ERROR: Workflow execution failed at step 4 while executing:
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get_genome.py \
--organism oryza_sativa \
--server ftp.ensembl.org \
--output /scratch/Asad/E.Coli-Resistant/multiqc_data/tmp/rice_paper_springer/raw/trimmomatic/ensemble_genome/os_db/
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Executing second time the same step/command in order to capture error messages (i.e. STDERR)...
Hi
I am working on the rice genome obtained from the ensemble. I installed fusioncatcher via conda using the commands described in your readme.
I ran the following command to build the database
fusioncatcher-build.py -g oryza_sativa -o /raw/trimmomatic/ensemble_genome/os_db
Can't figure out the issue...