ndaniel / fusioncatcher

Finder of Somatic Fusion Genes in RNA-seq data
GNU General Public License v3.0
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Configuration file '' not found! #205

Closed kopardev closed 1 year ago

kopardev commented 1 year ago

Getting this error

 + fusioncatcher -p 16 -d human_v102 -i Test3_R_T_R1.trim.fastq.gz,Test3_R_T_R2.trim.fastq.gz -o /lscratch/53871919/Test3_R_T_fusioncatcher
  WARNING: Configuration file '' not found!  Moving on...
  ................................................................................
  ERROR: The version of configuration.cfg file does not contain the version of the fusioncatcher.py!
  Please, fix this!
  ................................................................................

Any idea how to fix this?

kopardev commented 1 year ago

I replaced fusioncatcher with fusioncatcher.py in the above command and everything worked fine. Nevermind!