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ndaniel / fusioncatcher

Finder of Somatic Fusion Genes in RNA-seq data
GNU General Public License v3.0
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about build error #73

Closed wengqi123 closed 6 years ago

wengqi123 commented 6 years ago

use command：

./bin/fusioncatcher-build -g homo_sapiens -o /haplox/users/wenger/pipe/RNA/fusion_human 

error ：
Downloading the viral genomes from NCBI server!
230 Anonymous access granted, restrictions apply
ERROR: File not 'all.fna.tar.gz' found!
ndaniel commented 6 years ago

The error is due to NCBI changing the URL for the viruses genomes and also the files names on October 20, 2017.

The newer version of https://github.com/ndaniel/fusioncatcher/blob/master/bin/get_viruses.py should fix this.

This will be fixed permanently in the next release of FusionCatcher that is v0.99.7e.

wengqi123 commented 6 years ago

ok ,thanks!

ndaniel commented 6 years ago

fixed in v1.00