Test Gene Grounding APIs - Githubissues

ndexbio / gsoc_llm

GSOC 2024 LLM Project

MIT License

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Test Gene Grounding APIs #3

Open cannin opened 1 month ago

cannin commented 1 month ago

Try grounding APIs to convert text like the examples below. For human genes you need to retrieve "HGNC" or "HUGO" gene symbols:

p53 to TP53
"p53 gene" to TP53

with

[ ] https://mygene.info/v3/api
[ ] http://grounding.indra.bio/ (demo code: https://gist.github.com/cannin/949db7c5a0bbce873704fe90cc58de5a)