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ndexbio / ndex2-client

NDEx2 Client
BSD 3-Clause "New" or "Revised" License
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Remove ndex2.client.Ndex2.search_networks_by_property_filter() since it always raises an exception #75

Open coleslaw481 opened 4 years ago

coleslaw481 commented 4 years ago

Remove ndex2.client.Ndex2.search_networks_by_property_filter() since it always raises an exception

coleslaw481 commented 4 years ago

Fixed in 84d6d4e..6c72dbc v4.0.0 -> v4.0.0

ariutta commented 3 years ago

@coleslaw481 and @jingjingbic, with this method deprecated, what would you suggest is the best way for me to find a network by property? Here's my use case: I have additional data for many, but not all, of the networks in the PFOCR network set. This data is indexed on pfocr_id, which is one of the properties for each of these networks.

As an example, I have the disease annotation Atherosclerosis (DOID:1936) for the network with a pfocr_id of PMC4660682__12967_2015_712_Fig5_HTML.jpg. For a single network, it's easy enough to get the network id: 02d10b19-de9c-11ea-99da-0ac135e8bacf, but for tens of thousands of networks, it's harder. Right now, I'm looking at using get_network_summary to build a mapping file between network id and pfocr_id.

coleslaw481 commented 3 years ago

Re-opening ticket as a reminder to find a solution for ariutta