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ndierckx / NOVOPlasty

NOVOPlasty - The organelle assembler and heteroplasmy caller
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regex issue #144

Closed brunonevado closed 4 years ago

brunonevado commented 4 years ago

Hi,

Running the latest NOVOplasty (4.1) I got a regex error:

21786 bp assembledQuantifier follows nothing in regex; marked by <-- HERE in m/ <-- HERE TCTTATA/ at NOVOPlasty/NOVOPlasty4.1.pl line 15460.

Previous run with the same dataset but using a different K-mer terminated correctly, so doesn't seem to be an input issue.

Let me know if you need more info to deal with this, Thanks, Bruno

ndierckx commented 4 years ago

Hi,

Thanks for the reporting the bug, it were some redundant lines. I removed them so it should be fixed with version 4.2 I uploaded

Greets,

Nicolas