I need to assembly a nuclear gene, so I tried NOVOPlasty, but the result file only shows some contigs, such as _contigs_tmpproject.txt and _Contigs_1project.fasta and which may means the assembly quality is poor. So, I want to figure out whether someone had faced the same problem with me.
You can try with extended log set to 1 and send me that file
But if you try a nuclear gene, it will never circularise, so will only give a Contigs_1_project.fasta file
how long did it assemble
I need to assembly a nuclear gene, so I tried NOVOPlasty, but the result file only shows some contigs, such as _contigs_tmpproject.txt and _Contigs_1project.fasta and which may means the assembly quality is poor. So, I want to figure out whether someone had faced the same problem with me.