FEE with random local clock + codon position partitions + multiple threads

necrolyte2 / beast-mcmc

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FEE with random local clock + codon position partitions + multiple threads #756

Closed GoogleCodeExporter closed 9 years ago

GoogleCodeExporter commented 9 years ago

Attached is a basic example. A full evaluation error occurs when a new clock 
rate is proposed. One of the partition likelihoods evaluates properly but the 
other does not. If you use only one thread (-threads 1) it doesn't happen.

You also get differing behaviour for multiple runs with the same seed.

Original issue reported on code.google.com by mdhall272 on 30 Jan 2015 at 9:32

Attachments:

Dengue4_example.xml

GoogleCodeExporter commented 9 years ago

This is also happening with multi-partitions and a local clock model.

Original comment by ramb...@gmail.com on 3 Feb 2015 at 1:20

Added labels: Milestone-Release1.8.2, beast, v1.8.1

GoogleCodeExporter commented 9 years ago

Issue 733 has been merged into this issue.

Original comment by ramb...@gmail.com on 3 Feb 2015 at 1:24

GoogleCodeExporter commented 9 years ago

This issue was closed by revision r6676.

Original comment by ramb...@gmail.com on 3 Feb 2015 at 1:44

Changed state: Fixed