Could not load dynamic library

[KeironO]

Hey there,

I'm trying to set up a fresh Fedora 30 install with CUDA, and are running into a couple issues.

Installing tensorflow-gpu using pip causes no issues:

(env) [keo7@pc3ke07 tmp]$ pip install tensorflow-gpu keras
Collecting tensorflow-gpu
  Downloading https://files.pythonhosted.org/packages/a1/eb/bc0784af18f612838f90419cf4805c37c20ddb957f5ffe0c42144562dcfa/tensorflow_gpu-2.0.0-cp37-cp37m-manylinux2010_x86_64.whl (380.8MB)
     |████████████████████████████████| 380.8MB 100.7MB/s 
Collecting keras
  Downloading https://files.pythonhosted.org/packages/ad/fd/6bfe87920d7f4fd475acd28500a42482b6b84479832bdc0fe9e589a60ceb/Keras-2.3.1-py2.py3-none-any.whl (377kB)
     |████████████████████████████████| 378kB 41.8MB/s 
Collecting absl-py>=0.7.0 (from tensorflow-gpu)
  Downloading https://files.pythonhosted.org/packages/3c/0d/7cbf64cac3f93617a2b6b079c0182e4a83a3e7a8964d3b0cc3d9758ba002/absl-py-0.8.0.tar.gz (102kB)
     |████████████████████████████████| 112kB 44.5MB/s 
Collecting astor>=0.6.0 (from tensorflow-gpu)
  Downloading https://files.pythonhosted.org/packages/d1/4f/950dfae467b384fc96bc6469de25d832534f6b4441033c39f914efd13418/astor-0.8.0-py2.py3-none-any.whl
Collecting keras-applications>=1.0.8 (from tensorflow-gpu)
  Downloading https://files.pythonhosted.org/packages/71/e3/19762fdfc62877ae9102edf6342d71b28fbfd9dea3d2f96a882ce099b03f/Keras_Applications-1.0.8-py3-none-any.whl (50kB)
     |████████████████████████████████| 51kB 29.8MB/s 
Collecting termcolor>=1.1.0 (from tensorflow-gpu)
  Downloading https://files.pythonhosted.org/packages/8a/48/a76be51647d0eb9f10e2a4511bf3ffb8cc1e6b14e9e4fab46173aa79f981/termcolor-1.1.0.tar.gz
Collecting wrapt>=1.11.1 (from tensorflow-gpu)
  Downloading https://files.pythonhosted.org/packages/23/84/323c2415280bc4fc880ac5050dddfb3c8062c2552b34c2e512eb4aa68f79/wrapt-1.11.2.tar.gz
Collecting keras-preprocessing>=1.0.5 (from tensorflow-gpu)
  Downloading https://files.pythonhosted.org/packages/28/6a/8c1f62c37212d9fc441a7e26736df51ce6f0e38455816445471f10da4f0a/Keras_Preprocessing-1.1.0-py2.py3-none-any.whl (41kB)
     |████████████████████████████████| 51kB 24.6MB/s 
Collecting google-pasta>=0.1.6 (from tensorflow-gpu)
  Downloading https://files.pythonhosted.org/packages/d0/33/376510eb8d6246f3c30545f416b2263eee461e40940c2a4413c711bdf62d/google_pasta-0.1.7-py3-none-any.whl (52kB)
     |████████████████████████████████| 61kB 21.1MB/s 
Collecting opt-einsum>=2.3.2 (from tensorflow-gpu)
  Downloading https://files.pythonhosted.org/packages/b8/83/755bd5324777875e9dff19c2e59daec837d0378c09196634524a3d7269ac/opt_einsum-3.1.0.tar.gz (69kB)
     |████████████████████████████████| 71kB 23.4MB/s 
Collecting numpy<2.0,>=1.16.0 (from tensorflow-gpu)
  Downloading https://files.pythonhosted.org/packages/ba/e0/46e2f0540370f2661b044647fa447fef2ecbcc8f7cdb4329ca2feb03fb23/numpy-1.17.2-cp37-cp37m-manylinux1_x86_64.whl (20.3MB)
     |████████████████████████████████| 20.3MB 44.4MB/s 
Requirement already satisfied: wheel>=0.26 in ./env/lib/python3.7/site-packages (from tensorflow-gpu) (0.33.6)
Collecting tensorboard<2.1.0,>=2.0.0 (from tensorflow-gpu)
  Downloading https://files.pythonhosted.org/packages/9b/a6/e8ffa4e2ddb216449d34cfcb825ebb38206bee5c4553d69e7bc8bc2c5d64/tensorboard-2.0.0-py3-none-any.whl (3.8MB)
     |████████████████████████████████| 3.8MB 40.6MB/s 
Collecting gast==0.2.2 (from tensorflow-gpu)
  Downloading https://files.pythonhosted.org/packages/4e/35/11749bf99b2d4e3cceb4d55ca22590b0d7c2c62b9de38ac4a4a7f4687421/gast-0.2.2.tar.gz
Collecting protobuf>=3.6.1 (from tensorflow-gpu)
  Downloading https://files.pythonhosted.org/packages/d7/34/02a2083afc14adff644a1e29783f276f12f1f914ca4cab157d73bb3d2fed/protobuf-3.10.0-cp37-cp37m-manylinux1_x86_64.whl (1.3MB)
     |████████████████████████████████| 1.3MB 46.3MB/s 
Collecting grpcio>=1.8.6 (from tensorflow-gpu)
  Downloading https://files.pythonhosted.org/packages/68/2d/2fe51d8382994cc0d4f9734367e8c159808ef2c367c6672722a509c9d5b2/grpcio-1.24.1-cp37-cp37m-manylinux1_x86_64.whl (2.3MB)
     |████████████████████████████████| 2.3MB 38.3MB/s 
Collecting tensorflow-estimator<2.1.0,>=2.0.0 (from tensorflow-gpu)
  Downloading https://files.pythonhosted.org/packages/95/00/5e6cdf86190a70d7382d320b2b04e4ff0f8191a37d90a422a2f8ff0705bb/tensorflow_estimator-2.0.0-py2.py3-none-any.whl (449kB)
     |████████████████████████████████| 450kB 37.4MB/s 
Collecting six>=1.10.0 (from tensorflow-gpu)
  Downloading https://files.pythonhosted.org/packages/73/fb/00a976f728d0d1fecfe898238ce23f502a721c0ac0ecfedb80e0d88c64e9/six-1.12.0-py2.py3-none-any.whl
Collecting h5py (from keras)
  Downloading https://files.pythonhosted.org/packages/3f/c0/abde58b837e066bca19a3f7332d9d0493521d7dd6b48248451a9e3fe2214/h5py-2.10.0-cp37-cp37m-manylinux1_x86_64.whl (2.9MB)
     |████████████████████████████████| 2.9MB 47.7MB/s 
Collecting pyyaml (from keras)
  Downloading https://files.pythonhosted.org/packages/e3/e8/b3212641ee2718d556df0f23f78de8303f068fe29cdaa7a91018849582fe/PyYAML-5.1.2.tar.gz (265kB)
     |████████████████████████████████| 266kB 39.3MB/s 
Collecting scipy>=0.14 (from keras)
  Downloading https://files.pythonhosted.org/packages/94/7f/b535ec711cbcc3246abea4385d17e1b325d4c3404dd86f15fc4f3dba1dbb/scipy-1.3.1-cp37-cp37m-manylinux1_x86_64.whl (25.2MB)
     |████████████████████████████████| 25.2MB 40.5MB/s 
Collecting markdown>=2.6.8 (from tensorboard<2.1.0,>=2.0.0->tensorflow-gpu)
  Downloading https://files.pythonhosted.org/packages/c0/4e/fd492e91abdc2d2fcb70ef453064d980688762079397f779758e055f6575/Markdown-3.1.1-py2.py3-none-any.whl (87kB)
     |████████████████████████████████| 92kB 21.2MB/s 
Requirement already satisfied: setuptools>=41.0.0 in ./env/lib/python3.7/site-packages (from tensorboard<2.1.0,>=2.0.0->tensorflow-gpu) (41.4.0)
Collecting werkzeug>=0.11.15 (from tensorboard<2.1.0,>=2.0.0->tensorflow-gpu)
  Downloading https://files.pythonhosted.org/packages/ce/42/3aeda98f96e85fd26180534d36570e4d18108d62ae36f87694b476b83d6f/Werkzeug-0.16.0-py2.py3-none-any.whl (327kB)
     |████████████████████████████████| 327kB 48.3MB/s 
Building wheels for collected packages: absl-py, termcolor, wrapt, opt-einsum, gast, pyyaml
  Building wheel for absl-py (setup.py) ... done
  Created wheel for absl-py: filename=absl_py-0.8.0-cp37-none-any.whl size=120987 sha256=66b415184fa6b8f869899db0a6e69f30999fd584e65558500217eb889581b72a
  Stored in directory: /home/keo7/.cache/pip/wheels/9a/1e/7a/456008eb5e47fd5de792c6139df6d5b3d5f71d51c6a0b94799
  Building wheel for termcolor (setup.py) ... done
  Created wheel for termcolor: filename=termcolor-1.1.0-cp37-none-any.whl size=4832 sha256=7eaed30986b18a6fcdd85dcc0199ee3b6df4d96107161f4d3d28e5d422031419
  Stored in directory: /home/keo7/.cache/pip/wheels/7c/06/54/bc84598ba1daf8f970247f550b175aaaee85f68b4b0c5ab2c6
  Building wheel for wrapt (setup.py) ... done
  Created wheel for wrapt: filename=wrapt-1.11.2-cp37-cp37m-linux_x86_64.whl size=74012 sha256=be4c3c805dddf93e19c7c5314596eeb7fa0ed6cc511a50d426db3d8a5a5efd85
  Stored in directory: /home/keo7/.cache/pip/wheels/d7/de/2e/efa132238792efb6459a96e85916ef8597fcb3d2ae51590dfd
  Building wheel for opt-einsum (setup.py) ... done
  Created wheel for opt-einsum: filename=opt_einsum-3.1.0-cp37-none-any.whl size=61682 sha256=4b13d497a93159ade80425d5642277acceaeb15c9da25a4a713010fdc12bbf3d
  Stored in directory: /home/keo7/.cache/pip/wheels/2c/b1/94/43d03e130b929aae7ba3f8d15cbd7bc0d1cb5bb38a5c721833
  Building wheel for gast (setup.py) ... done
  Created wheel for gast: filename=gast-0.2.2-cp37-none-any.whl size=7540 sha256=48513ee632ffcb4b2ced32e369f5e8cdbe2240f58bb88d9a8816a37c659d06a0
  Stored in directory: /home/keo7/.cache/pip/wheels/5c/2e/7e/a1d4d4fcebe6c381f378ce7743a3ced3699feb89bcfbdadadd
  Building wheel for pyyaml (setup.py) ... done
  Created wheel for pyyaml: filename=PyYAML-5.1.2-cp37-cp37m-linux_x86_64.whl size=44103 sha256=323bc3d05d24e121b0713b2d561c741cad6d241d976af0342c634d244169f230
  Stored in directory: /home/keo7/.cache/pip/wheels/d9/45/dd/65f0b38450c47cf7e5312883deb97d065e030c5cca0a365030
Successfully built absl-py termcolor wrapt opt-einsum gast pyyaml
Installing collected packages: six, absl-py, astor, numpy, h5py, keras-applications, termcolor, wrapt, keras-preprocessing, google-pasta, opt-einsum, protobuf, markdown, grpcio, werkzeug, tensorboard, gast, tensorflow-estimator, tensorflow-gpu, pyyaml, scipy, keras
Successfully installed absl-py-0.8.0 astor-0.8.0 gast-0.2.2 google-pasta-0.1.7 grpcio-1.24.1 h5py-2.10.0 keras-2.3.1 keras-applications-1.0.8 keras-preprocessing-1.1.0 markdown-3.1.1 numpy-1.17.2 opt-einsum-3.1.0 protobuf-3.10.0 pyyaml-5.1.2 scipy-1.3.1 six-1.12.0 tensorboard-2.0.0 tensorflow-estimator-2.0.0 tensorflow-gpu-2.0.0 termcolor-1.1.0 werkzeug-0.16.0 wrapt-1.11.2

But when I attempt to access my GPU via tensorflow, I ge t the following errors:

>>> from keras import backend as K
Using TensorFlow backend.
>>> K.tensorflow_backend._get_available_gpus()
2019-10-07 22:19:09.611711: I tensorflow/stream_executor/cuda/cuda_gpu_executor.cc:1006] successful NUMA node read from SysFS had negative value (-1), but there must be at least one NUMA node, so returning NUMA node zero
2019-10-07 22:19:09.613041: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1618] Found device 0 with properties: 
name: TITAN V major: 7 minor: 0 memoryClockRate(GHz): 1.455
pciBusID: 0000:26:00.0
2019-10-07 22:19:09.613223: W tensorflow/stream_executor/platform/default/dso_loader.cc:55] Could not load dynamic library 'libcudart.so.10.0'; dlerror: libcudart.so.10.0: cannot open shared object file: No such file or directory
2019-10-07 22:19:09.613339: W tensorflow/stream_executor/platform/default/dso_loader.cc:55] Could not load dynamic library 'libcublas.so.10.0'; dlerror: libcublas.so.10.0: cannot open shared object file: No such file or directory
2019-10-07 22:19:09.613449: W tensorflow/stream_executor/platform/default/dso_loader.cc:55] Could not load dynamic library 'libcufft.so.10.0'; dlerror: libcufft.so.10.0: cannot open shared object file: No such file or directory
2019-10-07 22:19:09.613563: W tensorflow/stream_executor/platform/default/dso_loader.cc:55] Could not load dynamic library 'libcurand.so.10.0'; dlerror: libcurand.so.10.0: cannot open shared object file: No such file or directory
2019-10-07 22:19:09.613671: W tensorflow/stream_executor/platform/default/dso_loader.cc:55] Could not load dynamic library 'libcusolver.so.10.0'; dlerror: libcusolver.so.10.0: cannot open shared object file: No such file or directory
2019-10-07 22:19:09.613775: W tensorflow/stream_executor/platform/default/dso_loader.cc:55] Could not load dynamic library 'libcusparse.so.10.0'; dlerror: libcusparse.so.10.0: cannot open shared object file: No such file or directory
2019-10-07 22:19:09.613879: W tensorflow/stream_executor/platform/default/dso_loader.cc:55] Could not load dynamic library 'libcudnn.so.7'; dlerror: libcudnn.so.7: cannot open shared object file: No such file or directory
2019-10-07 22:19:09.613917: W tensorflow/core/common_runtime/gpu/gpu_device.cc:1641] Cannot dlopen some GPU libraries. Please make sure the missing libraries mentioned above are installed properly if you would like to use GPU. Follow the guide at https://www.tensorflow.org/install/gpu for how to download and setup the required libraries for your platform.
Skipping registering GPU devices...
2019-10-07 22:19:09.614465: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1159] Device interconnect StreamExecutor with strength 1 edge matrix:
2019-10-07 22:19:09.614500: I tensorflow/core/common_runtime/gpu/gpu_device.cc:1165]      

Best wishes,

Keiron