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neheller / kits21

The official repository of the 2021 Kidney and Kidney Tumor Segmentation Challenge
MIT License
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Can't get imaging.nii.gz after run get_imaging.py #39

Closed charrywhite closed 3 years ago

charrywhite commented 3 years ago

Hello,

I meet a problem after I run get_imaging.py. In my downloaded data folder, it seems imaging.nii.gz is missing. I would like to ask how can I access the imaging.nii.gz files? Hope for your reply :)

neheller commented 3 years ago

The get_imaging.py script should download the files and place them at kits21/data/case_XXXXX/imaging.nii.gz for each of the 300 cases. Are they not showing up there? Is the script printing any messages to the console when it runs?

charrywhite commented 3 years ago

Thanks for your reply. It doesn't really run get_imaging.py when I used python3 kits21/starter_code/get_imaging.py previously. Now I change python3 to python and it works!