neherlab / covid19_scenarios_data

Data preprocessing scripts and preprocessed data storage for COVID-19 Scenarios project
https://github.com/neherlab/covid19_scenarios
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Feat/initial condition json [pr: wip] #38

Closed nnoll closed 4 years ago

nnoll commented 4 years ago

This is a WIP branch that restructures how we input default scenarios into the app that should be more flexible than the current version. I've introduced a python script "scripts/collect_scenario_initial_conditions.py" that will collect a global json file that holds all form values that should be filled in for each scenario by default"

This is part of a larger change that should simplify the app which will allow for one global toggle of scenarios.

NOTE: This is reliant on chore/mv-tools branch which included a re-partitioning of the tool directory that was previously within covid19_scenarios.