neherlab / pan-genome-analysis

Processing pipeline for pan-genome visulization and exploration
http://pangenome.de
GNU General Public License v3.0
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No module Numpy #33

Closed pavlohrab closed 4 years ago

pavlohrab commented 4 years ago

I am using Google cloud to run panX : Ubuntu 18.04. The following error arises: Traceback (most recent call last): File "./panX.py", line 6, in from pangenome_computation import pangenome File "/home/paul_hrab05/pan-genome-analysis/scripts/pangenome_computation.py", line 3, in from cluster_collective_processing import clusterCollector File "/home/paul_hrab05/pan-genome-analysis/scripts/cluster_collective_processing.py", line 1, in from sf_geneCluster_align_makeTree import cluster_align_makeTree File "/home/paul_hrab05/pan-genome-analysis/scripts/sf_geneCluster_align_makeTree.py", line 1, in import numpy as np ImportError: No module named numpy

However, numpy is installed. I was trying install via conda and pip - "module is installed". run_Test.sh encountered the same error. Can you help me? Thanks!