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neksa / mutagene

Python library and package for mutational analysis
https://www.ncbi.nlm.nih.gov/projects/mutagene/
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Redesign rank subpackage #50

Closed neksa closed 3 years ago

neksa commented 4 years ago

Simplify rank sub package to calculate everything from one input file

anna-panchenko commented 4 years ago

If an input file is provided, the ranking should be done using all three parameters from the input file ignoring precalculated cohorts (even if -c option is specified). If no input file but -c option is provided, the ranking should be done for all mutations from the precalculated cohort.