Is code is varying the B factor of the surrounding atoms as well, then the minimisation of the |Fo-Fc| will be biased to select the B factor of the main chain rather than the occupancy minima for the ligand?
Or this is wanted, as we want to get the minima of b factor for the local area?
Is code is varying the B factor of the surrounding atoms as well, then the minimisation of the |Fo-Fc| will be biased to select the B factor of the main chain rather than the occupancy minima for the ligand?
Or this is wanted, as we want to get the minima of b factor for the local area?