cosmetic changes to nemo analytics front page

nemoarchive / analytics

Repository for the NeMO Analytics project.

MIT License

1 stars 0 forks source link

cosmetic changes to nemo analytics front page #27

Closed seth-ament closed 5 years ago

seth-ament commented 5 years ago

[x] Create a NeMO Analytics logo (presumably closely related to the NeMO Archive logo) --> task for Lance?
[x] Switch "home" button logo in upper-left corner from gEAR to NeMO Analytics logo
[x] List NeMO funding sources at the bottom of the home page: 1R24MH114815-01A1, 1R24MH114788-01
[x] "Highlighted dataset" on front page is a cochlea dataset from gEAR...
[x] The "About" paragraph at the top of the front page needs to be updated to describe NeMO Analytics
[x] Add a "powered by gEAR" link somewhere on the page with a link to umgear.org

RLC-DCPPC commented 5 years ago

might look like this example: https://gcid.umgear.org

RLC-DCPPC commented 5 years ago

Link to NeMO data portal

seth-ament commented 5 years ago

NIMH logo (for funding): https://commons.wikimedia.org/wiki/File:US-NIH-NIMH-Logo.svg

seth-ament commented 5 years ago

As the highlighted dataset, let's use "Single-cell mRNA sequencing (scRNA-seq - 10X) in Prefrontal Cortex of individual at gestational week 19".

seth-ament commented 5 years ago

"About" paragraph: https://docs.google.com/document/d/10S4oHun0QpGOUe5iad2zrJnTz425VMWu4FwJBqN8_D0/edit?usp=sharing

jorvis commented 5 years ago

I switched the top to be checkboxes so I could indicate when each of these are done.

@seth-ament , the About section is overly long, and pushes everything else down the page. Could it be shortened and then possibly link to a 'read more' page or expander? That's a lot of text for landing screen.

seth-ament commented 5 years ago

About (updated 4/1 4pm)

The Neuroscience Multi-Omic (NeMO) Analytics portal enables web-based visualization and analysis of multi-omic data describing cell types in the developing and adult brain, powered by gEAR (umgear.org) and Epiviz (https://epiviz.github.io/). Release 1 (April 2019) includes single-cell and bulk tissue RNA-seq, ATAC-seq, and ChIP-seq from the fetal human prefrontal cortex, as well as from stem cell models of neural induction. The portal will expand to include multiple regions of the developing and adult brain and additional analytical tools. For more information, please see the << User Manual >> and << Tutorials >>.

jkanche commented 5 years ago

@jorvis If you need a logo for epiviz, Its available here - https://github.com/epiviz/epiviz/blob/master/img/epiviz_4_logo_medium.png

jorvis commented 5 years ago

@seth-ament - Do you have an image you want me to use for the highlighted dataset?

seth-ament commented 5 years ago

Let's use a screenshot of the tSNE colored by cell type, once we get that updated tomorrow morning.

jorvis commented 5 years ago

This was completed some time ago.