Convert VCF to Fasta - Githubissues

ness-lab / mrt

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Closed James-S-Santangelo closed 4 years ago

James-S-Santangelo commented 4 years ago

Rather large PR that combines multiple issues.

Closes #16
Closes #17
Closes #18
Tabix index and sort VCFs exported from SLiM
Use scripts previously written by Ahmed that converts the VCFs to Fasta
Create Rproject for development of R scripts and use Packrat for R dependency management
Some minor fixes to syntax, imports, requirements, etc.

James-S-Santangelo commented 4 years ago

Shadow merging since no additional review required.