netZoo / netZooR

netZooR is a network biology package implemented in R.
https://netzoo.github.io/
GNU General Public License v3.0
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installation failed for R version 3.4.4 #195

Closed aconkli4 closed 3 years ago

aconkli4 commented 3 years ago

Hi, I am trying install NetZooR.

Our OS is Ubuntu 18.0.5 LTS

We are using R v3.4.4 (released on 2018/03/15)

When I run devtools::install_github("netZoo/netZooR", build_vignettes = FALSE) I get the following error:

`ERROR: dependency ‘plotrix’ is not available for package ‘STRINGdb’

The downloaded source packages are in ‘/tmp/RtmpyVhPXb/downloaded_packages’ ✔ checking for file ‘/tmp/RtmpyVhPXb/remotes51aa6e1b3241/netZoo-netZooR-7e192ba/DESCRIPTION’ (696ms) ─ preparing ‘netZooR’: (1.8s) ✔ checking DESCRIPTION meta-information ─ checking for LF line-endings in source and make files and shell scripts ─ checking for empty or unneeded directories ─ looking to see if a ‘data/datalist’ file should be added ─ building ‘netZooR_0.9.tar.gz’

Installing package into ‘/home/aconklin/R/x86_64-pc-linux-gnu-library/3.4’ (as ‘lib’ is unspecified) ERROR: dependency ‘STRINGdb’ is not available for package ‘netZooR’

Will you please look into this for me? I appreciate any help.

Thanks, Austin

marouenbg commented 3 years ago

Hi Austin,

Unfortunately, plotrix requires R3.5 and higher https://cran.r-project.org/web/packages/plotrix/index.html if you can update R, that would be great.

Marouen

aconkli4 commented 3 years ago

Okay, that was my suspicion. Will do!

Thanks, Austin