netneurolab netneurotools issues

netneurolab / netneurotools

Useful tools from the Network Neuroscience Lab

https://netneurolab.github.io/netneurotools

BSD 3-Clause "New" or "Revised" License

60 stars 32 forks source link

issues

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[TEST] Fix GHA

#92 rmarkello closed 3 years ago
1
[ENH] Updates stats.efficient_pearsonr to handle NaNs

#91 rmarkello closed 3 years ago
1
[ENH] Added data_kws argument to plot_fsaverage

#90 VinceBaz closed 4 years ago
2
Added weight option for struct consensus

#89 gkiar closed 4 years ago
2
Add `fetch_brain_annotations()` function

#88 rmarkello closed 2 years ago
2
[ENH] Improves geodesic parcel centroids

#87 rmarkello closed 4 years ago
1
Allow spins with only one hemisphere

#86 rmarkello closed 3 years ago
0
[ENH] Adds lab-useful colormaps

#85 rmarkello closed 2 years ago
2
Conversion to float in freesurfer.parcels_to_vertices

#84 VinceBaz closed 3 years ago
1
[ENH] Adds info CSV file to von Economo fetcher

#83 rmarkello closed 4 years ago
1
[REF] Modifies freesurfer spins

#82 rmarkello closed 4 years ago
1
[ENH] Adds von Economo-Koskinas atlas fetcher

#81 rmarkello closed 4 years ago
1
[ENH] add features to plot_mod_heatmap

#80 liuzhenqi77 closed 4 years ago
2
[FIX] np.nanmean in func consensus when no boot

#79 VinceBaz closed 4 years ago
2
[REF] Pass through kwargs to plot_fsaverage

#78 rmarkello closed 4 years ago
1
[FIX] Minor change to spin sample generation

#77 rmarkello closed 4 years ago
1
[FIX] Fixes pysurfer opacity bug

#76 rmarkello closed 4 years ago
1
[ENH] Surface centroid calculation

#75 rmarkello closed 4 years ago
1
[FIX] Fix default fetch_cammoun2012 version

#74 rmarkello closed 4 years ago
1
[ENH] Add fslr32k schaefer atlases

#73 rmarkello closed 4 years ago
1
[FIX] Better path finding in nnplot.plot_fsaverage()

#72 rmarkello closed 4 years ago
1
[REF] Adds fs_LR_32k Cammoun 2012 atlases

#71 rmarkello closed 4 years ago
1
fetch_fsaverage() downloads in "~\nnt-data\tpl-fsaverage"

#70 VinceBaz closed 4 years ago
0
Can't find fetch_vazquez_rodriguez2019 attribute

#69 giuliabaracc closed 4 years ago
3
[FIX] Set aspect on 3D plot no longer valid

#68 rmarkello closed 4 years ago
1
[REF] Allow precomputed spins for spin_data

#67 rmarkello closed 4 years ago
1
[REF] Updates FreeSurfer-related spin test functionality

#66 rmarkello closed 4 years ago
1
[FIX] Fixes parcel dropping in nntools.freesurfer

#65 rmarkello closed 4 years ago
1
[ENH] Adds fsaverage5/6 annotation files for Cammoun 2012

#64 rmarkello closed 4 years ago
1
[FIX] Cleans up the code for func_consensus

#63 gshafiei closed 5 years ago
1
[ENH] Adds the option to have a list of time series as input in func_…

#62 gshafiei closed 5 years ago
1
[ENH] Adds Schaefer 2018 parcellation fetcher

#61 rmarkello closed 5 years ago
1
[ENH] Updates the NaN color in mayavi for plot_conte69

#60 gshafiei closed 5 years ago
1
[ENH] Adds spatial permutation methods for parcellated data

#59 rmarkello closed 5 years ago
1
[FIX] Corrects data dimension in plot_conte69

#58 gshafiei closed 5 years ago
1
[FIX] Sort list of indices in plot_fsaverage

#57 VinceBaz closed 5 years ago
0
[ENH,REF] Adds example for spin tests

#56 rmarkello closed 5 years ago
1
add option to not blank out diagonal in plot_mod_heatmap

#55 koudyk closed 5 years ago
3
[ENH] Added 'order' argument

#54 VinceBaz closed 5 years ago
1
[REF, ENH] Refactors `nntools.datasets` module

#53 rmarkello closed 5 years ago
1
[REF] Minor fixes to resources + FreeSurfer

#52 rmarkello closed 5 years ago
0
[ENH] Adds `noplot` param to plot_fsaverage()

#51 rmarkello closed 5 years ago
1
modify plot_fsaverage to manually input parcels that shouldn't be included

#50 VinceBaz closed 5 years ago
0
[ENH] Adds permutation tests for correlations

#49 rmarkello closed 5 years ago
1
Update fetch_fsaverage to check for FreeSurfer install first

#48 rmarkello closed 5 years ago
0
[MNT] Updates installation dependencies

#47 rmarkello closed 5 years ago
1
[ENH] Adds parcellation projection to/reduction from FreeSurfer vertices

#46 rmarkello closed 5 years ago
1
[REF] Updates gen_spinsamples for efficiency

#45 rmarkello closed 5 years ago
2
Add option to use Leiden algorithm in modularity.consensus_modularity()

#44 rmarkello opened 5 years ago
0
[DOC] Updates docs in Mirchi example

#43 rmarkello closed 5 years ago
10

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