neuroanatomy / BrainBox

BrainBox is a web application that lets you annotate and segment 3D brain imaging data in real time, collaboratively.
https://brainbox.pasteur.fr
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Split the Monkey Atlas in Cortical and Subcortical sub-atlases #202

Closed r03ert0 closed 5 years ago

r03ert0 commented 5 years ago

The pull request #150 by @Shotgunosine aimed at adding a comprehensive Monkey atlas label set to BrainBox. It has >300 labels for different regions of the brain. Unfortunately, BrainBox can only handle label sets with a maximum of 255 entries. Although it would be possible to change BrainBox to accept label sets with >255 entries, the label sets would be so big, that it would be cumbersome to have so many. We would indeed prefer to keep the 255 limit as it is. What we need then is to split the Monkey atlas into easy to digest bits, for example, separate all the Cortical from the Subcortical entries.

If you are a neuroscientist, that will not be hard for you : )

If you are not, most entries for cortical regions say "cortex", or "frontal, parietal, occipital, temporal lobe".

Would you be able to fix pull request #150 ?

r03ert0 commented 5 years ago

done!