neurodata / nshack17

Neurostorm Hackathon (2017 @ MBL)
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Dockerize FEM tools for comparison of FEM mesh generation pipelines. #19

Open m9h opened 7 years ago

m9h commented 7 years ago

We would like to dockerize fijee, iso2mesh, SimNIBS, forward and BioFEM. The most recent stable versions of each tool will be used and as best as possible we should use matching versions of CGAL, Gmsh, meshfix and other mesh libraries that are common dependencies across the pipelines. Several datasets will eventually be used for comparison but the initial dataset would be the OpenFMRI ds0117 which is Rik Henson's multimodal dataset which includes T1, T2, DWI and EMEG electrophysiology data.