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neurodatascience / nipoppy

Lightweight framework for neuroimaging-clinical data organization/processing
https://nipoppy.readthedocs.io/en/latest/
MIT License
10 stars 19 forks source link

[ENH] Add descriptors and sample invocations for BIDScoin #267

Open michellewang opened 2 weeks ago

michellewang commented 2 weeks ago

BIDScoin has three main CLI commands:

  1. bidsmapper: make the bidsmap
  2. bidseditor: edit the bidsmap
  3. bidscoiner: to the conversion

1 and 2 above involve a GUI, which is technically possible even with a container according to the docs (using xhost), though I wasn't able to make that work on Compute Canada. But in any case it is still possible to modify the descriptor and use a baremetal install

codecov[bot] commented 2 weeks ago

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Project coverage is 98.64%. Comparing base (fc3971f) to head (33196eb).

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #267 +/- ## ======================================= Coverage 98.64% 98.64% ======================================= Files 28 28 Lines 1766 1766 ======================================= Hits 1742 1742 Misses 24 24 ```

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