The issue: createfmr does not work for non-power-2 matrix sizes, e.g. for the Siemens DICOM mosaic images with 7x7 arrangement:
Image columns: 490
Image rows: 490
Number of slices: 45
Mosaic rows: 70
Mosaic columns: 70
The following warning is issued: "Warning: Slice.STCData has an invalid size.", and .stc file is not created.
The suspected reason: lines 689 and the following:
% get things into a square matrix with a power-2
psdim = [64, 96, 128, 192, 256];
mxdim = max(DimX, DimY);
mndim = find(mxdim <= psdim);
if isempty(mndim)
error( ...
'neuroelf:DataTooLarge', ...
'Data too large to fit into square matrix.' ...
);
end
acdim = psdim(mndim(1));
Suggested solution - to allow non-power-2 matrix size, replacing the code above with the following (works fine for me):
acdim = max(flags.xyres(1),flags.xyres(2))
The issue: createfmr does not work for non-power-2 matrix sizes, e.g. for the Siemens DICOM mosaic images with 7x7 arrangement:
The following warning is issued: "Warning: Slice.STCData has an invalid size.", and .stc file is not created.
The suspected reason: lines 689 and the following:
Suggested solution - to allow non-power-2 matrix size, replacing the code above with the following (works fine for me):
acdim = max(flags.xyres(1),flags.xyres(2))