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neurogenomics / CUT_n_TAG

Preprocessing pipeline for CUT&TAG data.
MIT License
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Compare CUT&TAG vs. ENCODE #3

Closed bschilder closed 3 years ago

bschilder commented 3 years ago

Compare Di's H3K27ac test CUT&TAG data with ENCODE's H3K27ac ChIP-seq data in K562 cells (e.g. correlate).

Data: https://www.encodeproject.org/experiments/ENCSR000AKP/

bschilder commented 3 years ago

Wrote rmarkdown script and knitted here: https://neurogenomics.github.io/CUT_n_TAG/scripts/visualize_peaks.html