Dev release of nf-core/cutandrun pipeline now available. Full launch scheduled at the end of Jan.
However unable to run the test example on HPC. Same error message no matter how I run it:
-bash-4.2$ nextflow run nf-core/cutandrun -profile test
N E X T F L O W ~ version 20.01.0
Launching `nf-core/cutandrun` [backstabbing_carlsson] - revision: 45316032bc [master]
Unknown config attribute `params.genomes.GRCh37.projectDir` -- check config file: /rds/general/user/bms20/home/.nextflow/assets/nf-core/cutandrun/nextflow.config
-bash-4.2$ nextflow run nf-core/cutandrun -profile test,singularity
N E X T F L O W ~ version 20.01.0
Launching `nf-core/cutandrun` [ecstatic_bartik] - revision: 45316032bc [master]
Unknown config attribute `params.genomes.GRCh37.projectDir` -- check config file: /rds/general/user/bms20/home/.nextflow/assets/nf-core/cutandrun/nextflow.config
-bash-4.2$ nextflow run nf-core/cutandrun -profile test,singularity,imperial
N E X T F L O W ~ version 20.01.0
Launching `nf-core/cutandrun` [scruffy_torricelli] - revision: 45316032bc [master]
Unknown config attribute `params.genomes.GRCh37.projectDir` -- check config file: /rds/general/user/bms20/home/.nextflow/assets/nf-core/cutandrun/nextflow.config
-bash-4.2$ nextflow run nf-core/cutandrun -profile imperial,test,singularity
N E X T F L O W ~ version 20.01.0
Launching `nf-core/cutandrun` [nasty_mandelbrot] - revision: 45316032bc [master]
Unknown config attribute `params.genomes.GRCh37.projectDir` -- check config file: /rds/general/user/bms20/home/.nextflow/assets/nf-core/cutandrun/nextflow.config
Dev release of nf-core/cutandrun pipeline now available. Full launch scheduled at the end of Jan.
However unable to run the test example on HPC. Same error message no matter how I run it:
Requested help from Slack channel here: https://nfcore.slack.com/archives/C01FKFZ57SA/p1611247052001200