Closed bschilder closed 2 years ago
Not sure exactly where this is happening, but make.unique()
might come in handy.
Ok, i see what happened. duplicate peak files for the sample samples are located in 03_peak_calling/04_called_peaks/ and 04_reporting/igv/
After omitting files from the latter folder, all names were unique.
Still, would be good to have a check at the beginning of your pipeline to check whether all names are unique. And if not, throw an error, or simply a warning saying that names will be forced to be unique.
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