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neurogenomics / rworkflows

Continuous integration for R packages. 🔀 Automates testing ✅, documentation website building 📦, & containerised deployment 🐳.
https://neurogenomics.github.io/rworkflows/
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Rearrange caching steps to optimise speed #121

Open bschilder opened 11 months ago

bschilder commented 11 months ago

As I've gone and added more and more steps to the rworkflows actions, I haven't really paid much attention to the R package caching steps. These were originally adapted from biocthis, and use the actions/cache action.

I'm now reevaluating these steps in their current context and trying to rearrange them to improve overall speed.

master branch (before): https://github.com/neurogenomics/rworkflows/blob/master/action.yml dev branch (latest tests): https://github.com/neurogenomics/rworkflows/blob/dev/action.yml

Something I noticed in biocthis is that caching doesn't occur on Linux. I'm assuming there's a reason for this, but I'm not sure what it is. Would you mind elaborating on this @lcolladotor ?

https://github.com/lcolladotor/biocthis/blob/d86021c7e642a684240bcdfd67dd371198988f48/.github/workflows/check-bioc.yml#L104

bschilder commented 11 months ago

I'd also like to explore caching software other than just R packages (eg system deps, latex packages). I'm not certain, but I don't this is being done currently.