Document the use of miniconda

neuroinformatics-unit / HowTo

NIU website on common software problems and their troubleshooting

http://howto.neuroinformatics.dev/

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Document the use of miniconda #45

Open adamltyson opened 8 months ago

adamltyson commented 8 months ago

There are many issues about documenting the use of conda. I think this means we should actually do it.

[ ] #44
[ ] #29
[x] #18

adamltyson commented 8 months ago

conda will be moving to the mamba solver so this means we should be able to just document miniconda and ignore the complexities of mamba et al.

niksirbi commented 7 months ago

We also discovered that creating a conda environment with the miniconda module during an interactive job (started via srun -p cpu --pty bash -i) is very slow. Creating the same environment on the gateway node seems to be faster. If confirmed, we should solve this or at least document it.