Find optimal centre of rotations

[lauraporta]

Is your feature request related to a problem? Please describe. The centre of rotation is not aligned with the centre of the image. It becomes very clear when doing np.max(original_video, axis=0)

Describe the solution you'd like I want a method to be added in the pipeline that finds this centre.

Describe alternatives you've considered I think there are two options: A) Fit an ellipse to the image:

• take the max projection (np.max())
• set a threshold and get binary image
• fit ellipse (with scikit-image) B) Use the two most bright cells, find their contours, and use geometry

[lauraporta]

Nice progress on this problem was done by @DhimanS07 in it's project