[REVIEW]: The quest for measuring myelin with MRI - An interactive meta-analysis

roboneuro commented 2 years ago

Submitting author: @agahkarakuzu (Agah Karakuzu) Repository: https://github.com/Notebook-Factory/myelin-meta-analysis Editor: @emdupre Reviewer: @ltetrel Jupyter Book: http://neurolibre-data-prod.conp.cloud/book-artifacts/roboneurolibre/github.com/myelin-meta-analysis/68ae71f025a2f2a506c72525730f8c44f6a2705d/_build/html/ Repository archive: 10.5281/zenodo.6463433 Data archive: 10.5281/zenodo.6463435 Book archive: 10.5281/zenodo.6463431 Docker archive: 10.5281/zenodo.6463437

Status

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Testers and authors:

Please avoid lengthy details of difficulties in the review thread. Instead, please create a new issue in the target repository and link to those issues (especially acceptance-blockers) by leaving comments in the review thread below. (For completists: if the target issue tracker is also on GitHub, linking the review thread in the issue or vice versa will create corresponding breadcrumb trails in the link target.)

Tester instructions & questions

@ltetrel, please carry out your review in this issue by updating the checklist below. If you cannot edit the checklist please:

Make sure you're logged in to your GitHub account
Be sure to accept the invite at this URL: https://github.com/openjournals/joss-reviews/invitations

The tester guidelines are available here: https://joss.readthedocs.io/en/latest/reviewer_guidelines.html. Any questions/concerns please let @emdupre know.

Review checklist for @ltetrel

Conflict of interest

[x] I confirm that I have read the JOSS conflict of interest (COI) policy and that: I have no COIs with reviewing this work or that any perceived COIs have been waived by JOSS for the purpose of this review.

Code of Conduct

[x] I confirm that I read and will adhere to the NeuroLibre code of conduct.

General checks

[x] #8
[x] License: Does the repository contain a plain-text LICENSE file with the contents of an OSI approved software license?
[x] Contribution and authorship: Has the submitting author (@agahkarakuzu) made major contributions to the software? Does the full list of paper authors seem appropriate and complete?
[x] Substantial scholarly effort: Does this submission meet the scope eligibility described in the JOSS guidelines

Functionality

[ ] #5
[ ] Functionality: Have the functional claims of the software been confirmed?
[ ] Performance: If there are any performance claims of the software, have they been confirmed? (If there are no claims, please check off this item.)

Documentation

[x] A statement of need: Do the authors clearly state what problems the software is designed to solve and who the target audience is?
[x] Installation instructions: Is there a clearly-stated list of dependencies? Ideally these should be handled with an automated package management solution.
[ ] Example usage: Do the authors include examples of how to use the software (ideally to solve real-world analysis problems).
[ ] Functionality documentation: Is the core functionality of the software documented to a satisfactory level (e.g., API method documentation)?
[ ] Automated tests: Are there automated tests or manual steps described so that the functionality of the software can be verified?
[ ] Community guidelines: Are there clear guidelines for third parties wishing to 1) Contribute to the software 2) Report issues or problems with the software 3) Seek support

Software paper

[ ] Summary: Has a clear description of the high-level functionality and purpose of the software for a diverse, non-specialist audience been provided?
[ ] A statement of need: Do the authors clearly state what problems the software is designed to solve and who the target audience is?
[ ] State of the field: Do the authors describe how this software compares to other commonly-used packages?
[ ] Quality of writing: Is the paper well written (i.e., it does not require editing for structure, language, or writing quality)?
[ ] References: Is the list of references complete, and is everything cited appropriately that should be cited (e.g., papers, datasets, software)? Do references in the text use the proper citation syntax?

roboneuro commented 2 years ago

Hello human, I'm @roboneuro, a robot that can help you with some common managerial tasks. @ltetrel it looks like you're currently assigned to test this paper :tada:.

:star: Important :star:

If you haven't already, you should seriously consider unsubscribing from GitHub notifications for this (https://github.com/neurolibre/neurolibre-reviews) repository. As a reviewer, you're probably currently watching this repository which means for GitHub's default behaviour you will receive notifications (emails) for all reviews 😿

To fix this do the following two things:

Set yourself as 'Not watching' https://github.com/neurolibre/neurolibre-reviews:

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roboneuro commented 2 years ago

:point_right::page_facing_up: Download article proof :page_facing_up: View article proof on GitHub :page_facing_up: :point_left:

roboneuro commented 2 years ago

:point_right::page_facing_up: View built NeuroLibre Notebook :page_facing_up::point_left:

agahkarakuzu commented 2 years ago

@roboneuro build nl-notebook

roboneuro commented 2 years ago

I'm sorry dear human, I don't understand that. You can see what commands I support by typing:

@roboneuro commands

agahkarakuzu commented 2 years ago

@roboneuro generate nl-notebook

roboneuro commented 2 years ago

:seedling: We are currently building your NeuroLibre notebook! Good things take time :seedling:

roboneuro commented 2 years ago

:point_right::page_facing_up: View built NeuroLibre Notebook :page_facing_up::point_left:

agahkarakuzu commented 2 years ago

@ltetrel I have responded to the issues you raised.

Quick note, despite that my config requests binder_url as follows:

https://github.com/Notebook-Factory/myelin-meta-analysis/blob/f5ace45de1519ac42a1bbc3fd504d566f4cc8b79/content/_config.yml#L29

The BinderHub link ends up taking me to mybinder.

ltetrel commented 2 years ago

Ok, I replied to you in the issue.

agahkarakuzu commented 2 years ago

@roboneuro generate nl-notebook

roboneuro commented 2 years ago

I'm sorry dear human, I don't understand that. You can see what commands I support by typing:

@roboneuro commands

agahkarakuzu commented 2 years ago

@roboneuro generate nl-notebook

roboneuro commented 2 years ago

:seedling: We are currently building your NeuroLibre notebook! Good things take time :seedling:

roboneuro commented 2 years ago

:point_right::page_facing_up: View built NeuroLibre Notebook :page_facing_up::point_left:

agahkarakuzu commented 2 years ago

OK beautiful, it incorporates the latest change I made to the text, yet the BinderHub links are still pointing to mybinder.org despite _config directive is binder.conp.cloud.

ltetrel commented 2 years ago

Alright @agahkarakuzu , at this stage I was able to reproduce everything without any issues. The are still (quite minor) issues, but all of them should be resolved mostly by the binder link issue: https://github.com/Notebook-Factory/myelin-meta-analysis/issues/5

We are close to our first NeuroLibre completed submission!!!

agahkarakuzu commented 2 years ago

@roboneuro generate nl-notebook

roboneuro commented 2 years ago

:seedling: We are currently building your NeuroLibre notebook! Good things take time :seedling:

roboneuro commented 2 years ago

:point_right::page_facing_up: View built NeuroLibre Notebook :page_facing_up::point_left:

agahkarakuzu commented 2 years ago

@roboneuro generate nl-notebook

roboneuro commented 2 years ago

:seedling: We are currently building your NeuroLibre notebook! Good things take time :seedling:

ltetrel commented 2 years ago

Ups:

Unable to find image 'binder-registry.conp.cloud/binder-registry.conp.cloud/binder-notebook-2dfactory-2dmyelin-2dmeta-2danalysis-a6e591:c4df5eb793ee760bbb0f9bdaeab217dced8d7bc0' locally
docker: Error response from daemon: Get https://binder-registry.conp.cloud/v2/binder-registry.conp.cloud/binder-notebook-2dfactory-2dmyelin-2dmeta-2danalysis-a6e591/manifests/c4df5eb793ee760bbb0f9bdaeab217dced8d7bc0: no basic auth credentials.
See 'docker run --help'.

I will re-try

ltetrel commented 2 years ago

@roboneuro generate nl-notebook

roboneuro commented 2 years ago

:seedling: We are currently building your NeuroLibre notebook! Good things take time :seedling:

roboneuro commented 2 years ago

We ran into a problem building your book. :(

                  <details>
                  ["Found built imag", "server running at https://binder.conp.cloud/jupyter/user/notebook-factor-n-meta-analysis-nnu703ay/\\n\", \"image\": \"binder-registry.conp.cloud/binder-registry.conp.cloud/binder-notebook-2dfactory-2dmyelin-2dmeta-2danalysis-a6e591:c4df5eb793ee760bbb0f9bdaeab217dced8d7bc0\", \"repo_url\": \"https://github.com/Notebook-Factory/myelin-meta-analysis\", \"token\": \"wsUjp79sTWGyYcmUaX6POQ\", \"binder_ref_url\": \"https://github.com/Notebook-Factory/myelin-meta-analysis/tree/c4df5eb793ee760bbb0f9bdaeab217dced8d7bc0\", \"binder_launch_host\": \"https://binder.conp.cloud/\", \"binder_request\": \"v2/gh/Notebook-Factory/myelin-meta-analysis.git/c4df5eb793ee760bbb0f9bdaeab217dced8d7bc0\", \"binder_persistent_request\": \"v2/gh/Notebook-Factory/myelin-meta-analysis/c4df5eb793ee760bbb0f9bdaeab217dced8d7bc0"]
                  </details>

ltetrel commented 2 years ago

@roboneuro generate nl-notebook

roboneuro commented 2 years ago

:seedling: We are currently building your NeuroLibre notebook! Good things take time :seedling:

roboneuro commented 2 years ago

We ran into a problem building your book. :(

                  <details>
                  ["Found built imag", "server running at https://binder.conp.cloud/jupyter/user/notebook-factor-n-meta-analysis-cm80s772/\\n\", \"image\": \"binder-registry.conp.cloud/binder-registry.conp.cloud/binder-notebook-2dfactory-2dmyelin-2dmeta-2danalysis-a6e591:c4df5eb793ee760bbb0f9bdaeab217dced8d7bc0\", \"repo_url\": \"https://github.com/Notebook-Factory/myelin-meta-analysis\", \"token\": \"UqcugNlRQFqwfN2YQv_-Hg\", \"binder_ref_url\": \"https://github.com/Notebook-Factory/myelin-meta-analysis/tree/c4df5eb793ee760bbb0f9bdaeab217dced8d7bc0\", \"binder_launch_host\": \"https://binder.conp.cloud/\", \"binder_request\": \"v2/gh/Notebook-Factory/myelin-meta-analysis.git/c4df5eb793ee760bbb0f9bdaeab217dced8d7bc0\", \"binder_persistent_request\": \"v2/gh/Notebook-Factory/myelin-meta-analysis/c4df5eb793ee760bbb0f9bdaeab217dced8d7bc0"]
                  </details>

ltetrel commented 2 years ago

@roboneuro generate nl-notebook

roboneuro commented 2 years ago

:point_right::page_facing_up: View built NeuroLibre Notebook :page_facing_up::point_left:

emdupre commented 2 years ago

Well, the formatting on that <details> tag didn't come out at all like I wanted ! Good to know.

agahkarakuzu commented 2 years ago

@roboneuro generate nl-notebook

roboneuro commented 2 years ago

:seedling: We are currently building your NeuroLibre notebook! Good things take time :seedling:

agahkarakuzu commented 2 years ago

@roboneuro generate nl-notebook

roboneuro commented 2 years ago

:seedling: We are currently building your NeuroLibre notebook! Good things take time :seedling:

roboneuro commented 2 years ago

We ran into a problem building your book. :(

                  <details>
                  ["Found built imag", "Launch attempt 1 faile", "server running at https://binder.conp.cloud/jupyter/user/notebook-factor-n-meta-analysis-plyiag69/\\n\", \"image\": \"binder-registry.conp.cloud/binder-registry.conp.cloud/binder-notebook-2dfactory-2dmyelin-2dmeta-2danalysis-a6e591:57edf9b899aeb3ea67d28fe0769da83de666581b\", \"repo_url\": \"https://github.com/Notebook-Factory/myelin-meta-analysis\", \"token\": \"CqizP4CMT8KTyqvFmncScA\", \"binder_ref_url\": \"https://github.com/Notebook-Factory/myelin-meta-analysis/tree/57edf9b899aeb3ea67d28fe0769da83de666581b\", \"binder_launch_host\": \"https://binder.conp.cloud/\", \"binder_request\": \"v2/gh/Notebook-Factory/myelin-meta-analysis.git/57edf9b899aeb3ea67d28fe0769da83de666581b\", \"binder_persistent_request\": \"v2/gh/Notebook-Factory/myelin-meta-analysis/57edf9b899aeb3ea67d28fe0769da83de666581b"]
                  </details>

ltetrel commented 2 years ago

I am investigating the cluster right now, the binderhub itself seems to be functionning (also I just saw your pod, I will check the test API. Why RoboNeuro flag it as an error if it was built ?

agahkarakuzu commented 2 years ago

It maybe an issue with book build, the logs are from binder only for now afaik.

agahkarakuzu commented 2 years ago

Any response that is not a success code is registered as an error, maybe we can set additional checks for whatever non-200 this one is.

ltetrel commented 2 years ago

@roboneuro generate nl-notebook

roboneuro commented 2 years ago

:point_right::page_facing_up: View built NeuroLibre Notebook :page_facing_up::point_left:

agahkarakuzu commented 2 years ago

Amazing, now the notebooks are using binder.conp! There is a change in the style from what I have: was supposed to look like:

Maybe this has to do with jupyter-book version, will check that. Should I add repo2data ?

ltetrel commented 2 years ago

Ok you can create an issue on your repo to keep this thread clean. Personally I have no idea why is this issue :( Check also the issue that is remaining for the binder link (again on your repo).

pbellec commented 2 years ago

Neither thebe or jupyter hub links actually work at the moment.

ltetrel commented 2 years ago

@pbellec https://github.com/Notebook-Factory/myelin-meta-analysis/issues/5

agahkarakuzu commented 2 years ago

@roboneuro generate nl-notebook

roboneuro commented 2 years ago

:seedling: We are currently building your NeuroLibre notebook! Good things take time :seedling:

roboneuro commented 2 years ago

We ran into a problem building your book. :(

Click here to see build log


      ["Cloning into '/tmp/repo2docker968ywy4w'...\\n", "HEAD is now at bda67f2 Try weird toc paths for book linkings\\n", "Using RBuildPack builder\\n", "Step 1/70 : FROM buildpack-deps:bionic", "\\n", "Fetching base image...\\r", "Fetching base image...\\r", "Fetching base image...\\r", "Fetching base image...\\r", "Fetching base image...\\r", "Fetching base image...\\r", "Fetching base image...\\r", "Fetching base image...\\r", " ---> cb3fc72df6ea\\n", "Step 2/70 : ENV DEBIAN_FRONTEND=noninteractive", "\\n", " ---> Running in fc0910be12ca\\n", "Removing intermediate container fc0910be12ca\\n", " ---> 588cbab986c9\\n", "Step 3/70 : RUN apt-get -qq update &&     apt-get -qq install --yes --no-install-recommends locales > /dev/null &&     apt-get -qq purge &&     apt-get -qq clean &&     rm -rf /var/lib/apt/lists/*", "\\n", " ---> Running in df72bcce1e86\\n", "\\u001b[91mdebconf: delaying package configuration, since apt-utils is not installed\\n\\u001b[0m", "Removing intermediate container df72bcce1e86\\n", " ---> 1ff1563b4e3a\\n", "Step 4/70 : RUN echo \\\"en_US.UTF-8 UTF-8\\\" > /etc/locale.gen &&     locale-gen", "\\n", " ---> Running in e5b60a4523d9\\n", "Generating locales (this might take a while)...\\n", "  en_US.UTF-8", "...", " done\\n", "Generation complete.\\n", "Removing intermediate container e5b60a4523d9\\n", " ---> 06dc178e2014\\n", "Step 5/70 : ENV LC_ALL en_US.UTF-8", "\\n", " ---> Running in c68817815a10\\n", "Removing intermediate container c68817815a10\\n", " ---> 4dca83734c3a\\n", "Step 6/70 : ENV LANG en_US.UTF-8", "\\n", " ---> Running in 328c93bb1484\\n", "Removing intermediate container 328c93bb1484\\n", " ---> 39cc97159330\\n", "Step 7/70 : ENV LANGUAGE en_US.UTF-8", "\\n", " ---> Running in 841e87364fd1\\n", "Removing intermediate container 841e87364fd1\\n", " ---> ee4cccf672f8\\n", "Step 8/70 : ENV SHELL /bin/bash", "\\n", " ---> Running in 2042c9080f66\\n", "Removing intermediate container 2042c9080f66\\n", " ---> 64cc8ea24970\\n", "Step 9/70 : ARG NB_USER", "\\n", " ---> Running in c576a2963c2a\\n", "Removing intermediate container c576a2963c2a\\n", " ---> ad5640de53ee\\n", "Step 10/70 : ARG NB_UID", "\\n", " ---> Running in 3e61484f5ae3\\n", "Removing intermediate container 3e61484f5ae3\\n", " ---> bec927af7319\\n", "Step 11/70 : ENV USER ${NB_USER}", "\\n", " ---> Running in ae4abc605c49\\n", "Removing intermediate container ae4abc605c49\\n", " ---> 17bf8e6140fc\\n", "Step 12/70 : ENV HOME /home/${NB_USER}", "\\n", " ---> Running in a382da4a28e8\\n", "Removing intermediate container a382da4a28e8\\n", " ---> a26ac83a1e4f\\n", "Step 13/70 : RUN groupadd         --gid ${NB_UID}         ${NB_USER} &&     useradd         --comment \\\"Default user\\\"         --create-home         --gid ${NB_UID}         --no-log-init         --shell /bin/bash         --uid ${NB_UID}         ${NB_USER}", "\\n", " ---> Running in 8f9e35f56bad\\n", "Removing intermediate container 8f9e35f56bad\\n", " ---> 22b59ebf0532\\n", "Step 14/70 : RUN wget --quiet -O - https://deb.nodesource.com/gpgkey/nodesource.gpg.key |  apt-key add - &&     DISTRO=\\\"bionic\\\" &&     echo \\\"deb https://deb.nodesource.com/node_14.x $DISTRO main\\\" >> /etc/apt/sources.list.d/nodesource.list &&     echo \\\"deb-src https://deb.nodesource.com/node_14.x $DISTRO main\\\" >> /etc/apt/sources.list.d/nodesource.list", "\\n", " ---> Running in 7af5864483c7\\n", "\\u001b[91mWarning: apt-key output should not be parsed (stdout is not a terminal)\\n\\u001b[0m", "OK\\n", "Removing intermediate container 7af5864483c7\\n", " ---> daf2f4c2d09c\\n", "Step 15/70 : RUN apt-get -qq update &&     apt-get -qq install --yes --no-install-recommends        less        nodejs        unzip        > /dev/null &&     apt-get -qq purge &&     apt-get -qq clean &&     rm -rf /var/lib/apt/lists/*", "\\n", " ---> Running in d0a4f73fe89a\\n", "\\u001b[91mdebconf: delaying package configuration, since apt-utils is not installed\\n\\u001b[0m", "Removing intermediate container d0a4f73fe89a\\n", " ---> 705794409218\\n", "Step 16/70 : RUN apt-get -qq update &&     apt-get -qq install --yes        libapparmor1        lsb-release        psmisc        sudo        > /dev/null &&     apt-get -qq purge &&     apt-get -qq clean &&     rm -rf /var/lib/apt/lists/*", "\\n", " ---> Running in 198434d5a7c4\\n", "\\u001b[91mdebconf: delaying package configuration, since apt-utils is not installed\\n\\u001b[0m", "Removing intermediate container 198434d5a7c4\\n", " ---> f628571f7df2\\n", "Step 17/70 : EXPOSE 8888", "\\n", " ---> Running in 0ef1c6710370\\n", "Removing intermediate container 0ef1c6710370\\n", " ---> 989352037b26\\n", "Step 18/70 : ENV APP_BASE /srv", "\\n", " ---> Running in a405a2f60c7a\\n", "Removing intermediate container a405a2f60c7a\\n", " ---> 24639bd2a260\\n", "Step 19/70 : ENV NPM_DIR ${APP_BASE}/npm", "\\n", " ---> Running in 9d7c63a7956f\\n", "Removing intermediate container 9d7c63a7956f\\n", " ---> a96ed87d474f\\n", "Step 20/70 : ENV NPM_CONFIG_GLOBALCONFIG ${NPM_DIR}/npmrc", "\\n", " ---> Running in b9e17404ec8e\\n", "Removing intermediate container b9e17404ec8e\\n", " ---> c40cb54aa7f0\\n", "Step 21/70 : ENV CONDA_DIR ${APP_BASE}/conda", "\\n", " ---> Running in c7ea53be81fc\\n", "Removing intermediate container c7ea53be81fc\\n", " ---> 112c6bb99f6e\\n", "Step 22/70 : ENV NB_PYTHON_PREFIX ${CONDA_DIR}/envs/notebook", "\\n", " ---> Running in f4352b60fcd4\\n", "Removing intermediate container f4352b60fcd4\\n", " ---> fee63b081626\\n", "Step 23/70 : ENV KERNEL_PYTHON_PREFIX ${NB_PYTHON_PREFIX}", "\\n", " ---> Running in 17cd092a0acb\\n", "Removing intermediate container 17cd092a0acb\\n", " ---> 010bdb25f9b7\\n", "Step 24/70 : ENV R_LIBS_USER ${APP_BASE}/rlibs", "\\n", " ---> Running in 2cd136587397\\n", "Removing intermediate container 2cd136587397\\n", " ---> ac9b9582a6b2\\n", "Step 25/70 : ENV PATH ${NB_PYTHON_PREFIX}/bin:${CONDA_DIR}/bin:${NPM_DIR}/bin:/usr/lib/rstudio-server/bin/:${PATH}", "\\n", " ---> Running in effb81d1e2d8\\n", "Removing intermediate container effb81d1e2d8\\n", " ---> 52f9af480dbe\\n", "Step 26/70 : COPY --chown=1000:1000 build_script_files/-2fusr-2flib-2fpython3-2e8-2fsite-2dpackages-2frepo2docker-2fbuildpacks-2fconda-2factivate-2dconda-2esh-391af5 /etc/profile.d/activate-conda.sh", "\\n", " ---> 83192e2b283b\\n", "Step 27/70 : COPY --chown=1000:1000 build_script_files/-2fusr-2flib-2fpython3-2e8-2fsite-2dpackages-2frepo2docker-2fbuildpacks-2fconda-2fenvironment-2epy-2d3-2e7-2efrozen-2eyml-037262 /tmp/environment.yml", "\\n", " ---> f99651b8d78e\\n", "Step 28/70 : COPY --chown=1000:1000 build_script_files/-2fusr-2flib-2fpython3-2e8-2fsite-2dpackages-2frepo2docker-2fbuildpacks-2fconda-2finstall-2dminiforge-2ebash-514214 /tmp/install-miniforge.bash", "\\n", " ---> c9d36c7c223b\\n", "Step 29/70 : RUN mkdir -p ${NPM_DIR} && chown -R ${NB_USER}:${NB_USER} ${NPM_DIR}", "\\n", " ---> Running in 0fc19b7ab1ef\\n", "Removing intermediate container 0fc19b7ab1ef\\n", " ---> 6bc97679231d\\n", "Step 30/70 : USER ${NB_USER}", "\\n", " ---> Running in 82baacc36e9e\\n", "Removing intermediate container 82baacc36e9e\\n", " ---> 039d16727d37\\n", "Step 31/70 : RUN npm config --global set prefix ${NPM_DIR}", "\\n", " ---> Running in 6ffdbc3de781\\n", "Removing intermediate container 6ffdbc3de781\\n", " ---> 304f66842ec4\\n", "Step 32/70 : USER root", "\\n", " ---> Running in 43bfae279634\\n", "Removing intermediate container 43bfae279634\\n", " ---> 54f2edec8801\\n", "Step 33/70 : RUN TIMEFORMAT='time: %3R' bash -c 'time /tmp/install-miniforge.bash' && rm /tmp/install-miniforge.bash /tmp/environment.yml", "\\n", " ---> Running in 88a5cf13354b\\n", "\\u001b[91m++ dirname /tmp/install-miniforge.bash\\n\\u001b[0m", "\\u001b[91m+ cd /tmp\\n+ MINIFORGE_VERSION=4.9.2-2\\n+ MAMBA_VERSION=0.7.4\\n+ SHA256SUM=7a7bfaff87680298304a97ba69bcf92f66c810995a7155a2918b99fafb8ca1dc\\n+ URL=https://github.com/conda-forge/miniforge/releases/download/4.9.2-2/Mambaforge-4.9.2-2-Linux-x86_64.sh\\n+ INSTALLER_PATH=/tmp/miniforge-installer.sh\\n+ unset HOME\\n\\u001b[0m", "\\u001b[91m+ wget --quiet https://github.com/conda-forge/miniforge/releases/download/4.9.2-2/Mambaforge-4.9.2-2-Linux-x86_64.sh -O /tmp/miniforge-installer.sh\\n\\u001b[0m", "\\u001b[91mtime: 11.861\\n+ chmod +x /tmp/miniforge-installer.sh\\n\\u001b[0m", "\\u001b[91m+ echo '7a7bfaff87680298304a97ba69bcf92f66c810995a7155a2918b99fafb8ca1dc  /tmp/miniforge-installer.sh'\\n+ sha256sum --quiet -c -\\n\\u001b[0m", "\\u001b[91m+ bash /tmp/miniforge-installer.sh -b -p /srv/conda\\n\\u001b[0m", "PREFIX=/srv/conda\\n", "Unpacking payload ...\\n", "\\u001b[91m\\r  0%|          | 0/57 [00:00=5.0 in /srv/conda/envs/notebook/lib/python3.7/site-packages (from notebook->jupyter-offlinenotebook==0.1.0) (6.0.4)\\n", "Requirement already satisfied: prometheus-client in /srv/conda/envs/notebook/lib/python3.7/site-packages 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notebook->jupyter-offlinenotebook==0.1.0) (19.0.1)\\n", "Requirement already satisfied: jinja2 in /srv/conda/envs/notebook/lib/python3.7/site-packages (from notebook->jupyter-offlinenotebook==0.1.0) (2.11.2)\\n", "Requirement already satisfied: Send2Trash in /srv/conda/envs/notebook/lib/python3.7/site-packages (from notebook->jupyter-offlinenotebook==0.1.0) (1.5.0)\\n", "Requirement already satisfied: ipython-genutils in /srv/conda/envs/notebook/lib/python3.7/site-packages (from notebook->jupyter-offlinenotebook==0.1.0) (0.2.0)\\n", "Requirement already satisfied: nbformat in /srv/conda/envs/notebook/lib/python3.7/site-packages (from notebook->jupyter-offlinenotebook==0.1.0) (5.0.7)\\n", "Requirement already satisfied: traitlets>=4.2.1 in /srv/conda/envs/notebook/lib/python3.7/site-packages (from notebook->jupyter-offlinenotebook==0.1.0) (4.3.3)\\n", "Requirement already satisfied: defusedxml in /srv/conda/envs/notebook/lib/python3.7/site-packages (from 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already satisfied: pexpect; sys_platform != \\\"win32\\\" in /srv/conda/envs/notebook/lib/python3.7/site-packages (from ipython>=5.0.0->ipykernel->notebook->jupyter-offlinenotebook==0.1.0) (4.8.0)\\n", "Requirement already satisfied: pickleshare in /srv/conda/envs/notebook/lib/python3.7/site-packages (from ipython>=5.0.0->ipykernel->notebook->jupyter-offlinenotebook==0.1.0) (0.7.5)\\n", "Requirement already satisfied: prompt-toolkit!=3.0.0,!=3.0.1,<3.1.0,>=2.0.0 in /srv/conda/envs/notebook/lib/python3.7/site-packages (from ipython>=5.0.0->ipykernel->notebook->jupyter-offlinenotebook==0.1.0) (3.0.5)\\n", "Requirement already satisfied: setuptools>=18.5 in /srv/conda/envs/notebook/lib/python3.7/site-packages (from ipython>=5.0.0->ipykernel->notebook->jupyter-offlinenotebook==0.1.0) (49.2.0.post20200712)\\n", "Requirement already satisfied: pyrsistent>=0.14.0 in /srv/conda/envs/notebook/lib/python3.7/site-packages (from jsonschema!=2.5.0,>=2.4->nbformat->notebook->jupyter-offlinenotebook==0.1.0) (0.16.0)\\n", "Requirement already satisfied: importlib-metadata; python_version < \\\"3.8\\\" in /srv/conda/envs/notebook/lib/python3.7/site-packages (from jsonschema!=2.5.0,>=2.4->nbformat->notebook->jupyter-offlinenotebook==0.1.0) (1.7.0)\\n", "Requirement already satisfied: attrs>=17.4.0 in /srv/conda/envs/notebook/lib/python3.7/site-packages (from jsonschema!=2.5.0,>=2.4->nbformat->notebook->jupyter-offlinenotebook==0.1.0) (19.3.0)\\n", "Requirement already satisfied: pyparsing>=2.0.2 in /srv/conda/envs/notebook/lib/python3.7/site-packages (from packaging->bleach->nbconvert->notebook->jupyter-offlinenotebook==0.1.0) (2.4.7)\\n", "Requirement already satisfied: parso<0.8.0,>=0.7.0 in /srv/conda/envs/notebook/lib/python3.7/site-packages (from jedi>=0.10->ipython>=5.0.0->ipykernel->notebook->jupyter-offlinenotebook==0.1.0) (0.7.1)\\n", "Requirement already satisfied: ptyprocess>=0.5 in /srv/conda/envs/notebook/lib/python3.7/site-packages (from pexpect; sys_platform != \\\"win32\\\"->ipython>=5.0.0->ipykernel->notebook->jupyter-offlinenotebook==0.1.0) (0.6.0)\\n", "Requirement already satisfied: wcwidth in /srv/conda/envs/notebook/lib/python3.7/site-packages (from prompt-toolkit!=3.0.0,!=3.0.1,<3.1.0,>=2.0.0->ipython>=5.0.0->ipykernel->notebook->jupyter-offlinenotebook==0.1.0) (0.2.5)\\n", "Requirement already satisfied: zipp>=0.5 in /srv/conda/envs/notebook/lib/python3.7/site-packages (from importlib-metadata; python_version < \\\"3.8\\\"->jsonschema!=2.5.0,>=2.4->nbformat->notebook->jupyter-offlinenotebook==0.1.0) (3.1.0)\\n", "Building wheels for collected packages: jupyter-offlinenotebook\\n", "  Building wheel for jupyter-offlinenotebook (setup.py): started\\n", "  Building wheel for jupyter-offlinenotebook (setup.py): finished with status 'done'\\n", "  Created wheel for jupyter-offlinenotebook: filename=jupyter_offlinenotebook-0.1.0-py3-none-any.whl size=485970 sha256=5c586e133bfb0c444090847b63cc1f65f03de6dc57dd699ff3ebec11097db4c7\\n  Stored in directory: /root/.cache/pip/wheels/b9/1e/a0/2ca4df7d24d239944d590847bd2b77f8c154ef5315d58f2d23\\n", "Successfully built jupyter-offlinenotebook\\n", "Installing collected packages: jupyter-offlinenotebook\\n", "Successfully installed jupyter-offlinenotebook-0.1.0\\n", "\\u001b[91mtime: 19.603\\n+ /srv/conda/envs/notebook/bin/jupyter labextension install --no-build jupyter-offlinenotebook\\n\\u001b[0m", "-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", 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"\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b-", "\\b\\\\", "\\b|", "\\b/", "\\b", "\\u001b[91mtime: 66.396\\n+ echo ''\\n+ [[ -f /tmp/kernel-environment.yml ]]\\n+ mamba clean --all -f -y\\n\\u001b[0m", "\\n                  __    __    __    __\\n                 /  \\\\  /  \\\\  /  \\\\  /  \\\\\\n                /    \\\\/    \\\\/    \\\\/    \\\\\\n\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588/  /\\u2588\\u2588/  /\\u2588\\u2588/  /\\u2588\\u2588/  /\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\n              /  / \\\\   / \\\\   / \\\\   / \\\\  \\\\____\\n             /  /   \\\\_/   \\\\_/   \\\\_/   \\\\    o \\\\__,\\n            / _/                       \\\\_____/  `\\n            |/\\n        \\u2588\\u2588\\u2588\\u2557   \\u2588\\u2588\\u2588\\u2557 \\u2588\\u2588\\u2588\\u2588\\u2588\\u2557 \\u2588\\u2588\\u2588\\u2557   \\u2588\\u2588\\u2588\\u2557\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2557  \\u2588\\u2588\\u2588\\u2588\\u2588\\u2557\\n        \\u2588\\u2588\\u2588\\u2588\\u2557 \\u2588\\u2588\\u2588\\u2588\\u2551\\u2588\\u2588\\u2554\\u2550\\u2550\\u2588\\u2588\\u2557\\u2588\\u2588\\u2588\\u2588\\u2557 \\u2588\\u2588\\u2588\\u2588\\u2551\\u2588\\u2588\\u2554\\u2550\\u2550\\u2588\\u2588\\u2557\\u2588\\u2588\\u2554\\u2550\\u2550\\u2588\\u2588\\u2557\\n        \\u2588\\u2588\\u2554\\u2588\\u2588\\u2588\\u2588\\u2554\\u2588\\u2588\\u2551\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2551\\u2588\\u2588\\u2554\\u2588\\u2588\\u2588\\u2588\\u2554\\u2588\\u2588\\u2551\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2554\\u255d\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2551\\n        \\u2588\\u2588\\u2551\\u255a\\u2588\\u2588\\u2554\\u255d\\u2588\\u2588\\u2551\\u2588\\u2588\\u2554\\u2550\\u2550\\u2588\\u2588\\u2551\\u2588\\u2588\\u2551\\u255a\\u2588\\u2588\\u2554\\u255d\\u2588\\u2588\\u2551\\u2588\\u2588\\u2554\\u2550\\u2550\\u2588\\u2588\\u2557\\u2588\\u2588\\u2554\\u2550\\u2550\\u2588\\u2588\\u2551\\n        \\u2588\\u2588\\u2551 \\u255a\\u2550\\u255d \\u2588\\u2588\\u2551\\u2588\\u2588\\u2551  \\u2588\\u2588\\u2551\\u2588\\u2588\\u2551 \\u255a\\u2550\\u255d \\u2588\\u2588\\u2551\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2554\\u255d\\u2588\\u2588\\u2551  \\u2588\\u2588\\u2551\\n        \\u255a\\u2550\\u255d     \\u255a\\u2550\\u255d\\u255a\\u2550\\u255d  \\u255a\\u2550\\u255d\\u255a\\u2550\\u255d     \\u255a\\u2550\\u255d\\u255a\\u2550\\u2550\\u2550\\u2550\\u2550\\u255d \\u255a\\u2550\\u255d  \\u255a\\u2550\\u255d\\n\\n        mamba (0.7.4) supported by @QuantStack\\n\\n        GitHub:  https://github.com/mamba-org/mamba\\n        Twitter: https://twitter.com/QuantStack\\n\\n\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\n\\nRemove all contents from the following package caches?\\n  - /srv/conda/pkgs\\n", "\\u001b[91mtime: 1.516\\n+ rm /tmp/miniforge-installer.sh\\n\\u001b[0m", "\\u001b[91m+ rm -rf /root/.cache\\n\\u001b[0m", "\\u001b[91m+ chown -R jovyan:jovyan /srv/conda\\n\\u001b[0m", "\\u001b[91m+ mamba list -n root\\n\\u001b[0m", "\\n                  __    __    __    __\\n                 /  \\\\  /  \\\\  /  \\\\  /  \\\\\\n                /    \\\\/    \\\\/    \\\\/    \\\\\\n\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588/  /\\u2588\\u2588/  /\\u2588\\u2588/  /\\u2588\\u2588/  /\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\n              /  / \\\\   / \\\\   / \\\\   / \\\\  \\\\____\\n             /  /   \\\\_/   \\\\_/   \\\\_/   \\\\    o \\\\__,\\n            / _/                       \\\\_____/  `\\n            |/\\n        \\u2588\\u2588\\u2588\\u2557   \\u2588\\u2588\\u2588\\u2557 \\u2588\\u2588\\u2588\\u2588\\u2588\\u2557 \\u2588\\u2588\\u2588\\u2557   \\u2588\\u2588\\u2588\\u2557\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2557  \\u2588\\u2588\\u2588\\u2588\\u2588\\u2557\\n        \\u2588\\u2588\\u2588\\u2588\\u2557 \\u2588\\u2588\\u2588\\u2588\\u2551\\u2588\\u2588\\u2554\\u2550\\u2550\\u2588\\u2588\\u2557\\u2588\\u2588\\u2588\\u2588\\u2557 \\u2588\\u2588\\u2588\\u2588\\u2551\\u2588\\u2588\\u2554\\u2550\\u2550\\u2588\\u2588\\u2557\\u2588\\u2588\\u2554\\u2550\\u2550\\u2588\\u2588\\u2557\\n        \\u2588\\u2588\\u2554\\u2588\\u2588\\u2588\\u2588\\u2554\\u2588\\u2588\\u2551\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2551\\u2588\\u2588\\u2554\\u2588\\u2588\\u2588\\u2588\\u2554\\u2588\\u2588\\u2551\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2554\\u255d\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2551\\n        \\u2588\\u2588\\u2551\\u255a\\u2588\\u2588\\u2554\\u255d\\u2588\\u2588\\u2551\\u2588\\u2588\\u2554\\u2550\\u2550\\u2588\\u2588\\u2551\\u2588\\u2588\\u2551\\u255a\\u2588\\u2588\\u2554\\u255d\\u2588\\u2588\\u2551\\u2588\\u2588\\u2554\\u2550\\u2550\\u2588\\u2588\\u2557\\u2588\\u2588\\u2554\\u2550\\u2550\\u2588\\u2588\\u2551\\n        \\u2588\\u2588\\u2551 \\u255a\\u2550\\u255d \\u2588\\u2588\\u2551\\u2588\\u2588\\u2551  \\u2588\\u2588\\u2551\\u2588\\u2588\\u2551 \\u255a\\u2550\\u255d \\u2588\\u2588\\u2551\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2554\\u255d\\u2588\\u2588\\u2551  \\u2588\\u2588\\u2551\\n        \\u255a\\u2550\\u255d     \\u255a\\u2550\\u255d\\u255a\\u2550\\u255d  \\u255a\\u2550\\u255d\\u255a\\u2550\\u255d     \\u255a\\u2550\\u255d\\u255a\\u2550\\u2550\\u2550\\u2550\\u2550\\u255d \\u255a\\u2550\\u255d  \\u255a\\u2550\\u255d\\n\\n        mamba (0.7.4) supported by @QuantStack\\n\\n        GitHub:  https://github.com/mamba-org/mamba\\n        Twitter: https://twitter.com/QuantStack\\n\\n\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\n\\n# packages in environment at /srv/conda:\\n#\\n# Name                    Version                   Build  Channel\\n_libgcc_mutex             0.1                 conda_forge    conda-forge\\n_openmp_mutex             4.5                       1_gnu    conda-forge\\nbrotlipy                  0.7.0           py38h8df0ef7_1001    conda-forge\\nbzip2                     1.0.8                h7f98852_4    conda-forge\\nc-ares                    1.17.1               h36c2ea0_0    conda-forge\\nca-certificates           2021.10.8            ha878542_0    conda-forge\\ncertifi                   2021.10.8        py38h578d9bd_0    conda-forge\\ncffi                      1.14.4           py38ha65f79e_1    conda-forge\\nchardet                   3.0.4           py38h924ce5b_1008    conda-forge\\nconda                     4.9.2            py38h578d9bd_0    conda-forge\\nconda-package-handling    1.7.2            py38h8df0ef7_0    conda-forge\\ncryptography              3.2.1            py38h7699a38_0    conda-forge\\nicu                       67.1                 he1b5a44_0    conda-forge\\nidna                      2.10               pyh9f0ad1d_0    conda-forge\\nkrb5                      1.17.2               h926e7f8_0    conda-forge\\nld_impl_linux-64          2.35.1               hed1e6ac_0    conda-forge\\nlibarchive                3.3.3             hddc7a2b_1008    conda-forge\\nlibcurl                   7.71.1               hcdd3856_8    conda-forge\\nlibedit                   3.1.20191231         he28a2e2_2    conda-forge\\nlibev                     4.33                 h516909a_1    conda-forge\\nlibffi                    3.3                  h58526e2_1    conda-forge\\nlibgcc-ng                 11.2.0              h1d223b6_11    conda-forge\\nlibgomp                   11.2.0              h1d223b6_11    conda-forge\\nlibiconv                  1.16                 h516909a_0    conda-forge\\nlibnghttp2                1.41.0               h8cfc5f6_2    conda-forge\\nlibsolv                   0.7.16               h8b12597_0    conda-forge\\nlibssh2                   1.9.0                hab1572f_5    conda-forge\\nlibstdcxx-ng              9.3.0               h2ae2ef3_17    conda-forge\\nlibxml2                   2.9.10               h68273f3_2    conda-forge\\nlz4-c                     1.9.2                he1b5a44_3    conda-forge\\nlzo                       2.10              h516909a_1000    conda-forge\\nmamba                     0.7.4            py38h4c9354d_0    conda-forge\\nncurses                   6.2                  h58526e2_4    conda-forge\\nopenssl                   1.1.1l               h7f98852_0    conda-forge\\npip                       20.3.1             pyhd8ed1ab_0    conda-forge\\npycosat                   0.6.3           py38h8df0ef7_1005    conda-forge\\npycparser                 2.20               pyh9f0ad1d_2    conda-forge\\npyopenssl                 20.0.0             pyhd8ed1ab_0    conda-forge\\npysocks                   1.7.1            py38h924ce5b_2    conda-forge\\npython                    3.8.6           hffdb5ce_1_cpython    conda-forge\\npython_abi                3.8                      1_cp38    conda-forge\\nreadline                  8.0                  he28a2e2_2    conda-forge\\nreproc                    14.2.1               h36c2ea0_0    conda-forge\\nreproc-cpp                14.2.1               h58526e2_0    conda-forge\\nrequests                  2.25.0             pyhd3deb0d_0    conda-forge\\nruamel_yaml               0.15.80         py38h8df0ef7_1003    conda-forge\\nsetuptools                49.6.0           py38h924ce5b_2    conda-forge\\nsix                       1.15.0             pyh9f0ad1d_0    conda-forge\\nsqlite                    3.34.0               h74cdb3f_0    conda-forge\\ntk                        8.6.10               hed695b0_1    conda-forge\\ntqdm                      4.54.1             pyhd8ed1ab_0    conda-forge\\nurllib3                   1.25.11                    py_0    conda-forge\\nwheel                     0.36.1             pyhd3deb0d_0    conda-forge\\nxz                        5.2.5                h516909a_1    conda-forge\\nyaml                      0.2.5                h516909a_0    conda-forge\\nzlib                      1.2.11            h516909a_1010    conda-forge\\nzstd                      1.4.5                h6597ccf_2    conda-forge\\n", "\\u001b[91m+ mamba list -p /srv/conda/envs/notebook\\n\\u001b[0m", "\\n                  __    __    __    __\\n                 /  \\\\  /  \\\\  /  \\\\  /  \\\\\\n                /    \\\\/    \\\\/    \\\\/    \\\\\\n\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588/  /\\u2588\\u2588/  /\\u2588\\u2588/  /\\u2588\\u2588/  /\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\n              /  / \\\\   / \\\\   / \\\\   / \\\\  \\\\____\\n             /  /   \\\\_/   \\\\_/   \\\\_/   \\\\    o \\\\__,\\n            / _/                       \\\\_____/  `\\n            |/\\n        \\u2588\\u2588\\u2588\\u2557   \\u2588\\u2588\\u2588\\u2557 \\u2588\\u2588\\u2588\\u2588\\u2588\\u2557 \\u2588\\u2588\\u2588\\u2557   \\u2588\\u2588\\u2588\\u2557\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2557  \\u2588\\u2588\\u2588\\u2588\\u2588\\u2557\\n        \\u2588\\u2588\\u2588\\u2588\\u2557 \\u2588\\u2588\\u2588\\u2588\\u2551\\u2588\\u2588\\u2554\\u2550\\u2550\\u2588\\u2588\\u2557\\u2588\\u2588\\u2588\\u2588\\u2557 \\u2588\\u2588\\u2588\\u2588\\u2551\\u2588\\u2588\\u2554\\u2550\\u2550\\u2588\\u2588\\u2557\\u2588\\u2588\\u2554\\u2550\\u2550\\u2588\\u2588\\u2557\\n        \\u2588\\u2588\\u2554\\u2588\\u2588\\u2588\\u2588\\u2554\\u2588\\u2588\\u2551\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2551\\u2588\\u2588\\u2554\\u2588\\u2588\\u2588\\u2588\\u2554\\u2588\\u2588\\u2551\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2554\\u255d\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2551\\n        \\u2588\\u2588\\u2551\\u255a\\u2588\\u2588\\u2554\\u255d\\u2588\\u2588\\u2551\\u2588\\u2588\\u2554\\u2550\\u2550\\u2588\\u2588\\u2551\\u2588\\u2588\\u2551\\u255a\\u2588\\u2588\\u2554\\u255d\\u2588\\u2588\\u2551\\u2588\\u2588\\u2554\\u2550\\u2550\\u2588\\u2588\\u2557\\u2588\\u2588\\u2554\\u2550\\u2550\\u2588\\u2588\\u2551\\n        \\u2588\\u2588\\u2551 \\u255a\\u2550\\u255d \\u2588\\u2588\\u2551\\u2588\\u2588\\u2551  \\u2588\\u2588\\u2551\\u2588\\u2588\\u2551 \\u255a\\u2550\\u255d \\u2588\\u2588\\u2551\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2554\\u255d\\u2588\\u2588\\u2551  \\u2588\\u2588\\u2551\\n        \\u255a\\u2550\\u255d     \\u255a\\u2550\\u255d\\u255a\\u2550\\u255d  \\u255a\\u2550\\u255d\\u255a\\u2550\\u255d     \\u255a\\u2550\\u255d\\u255a\\u2550\\u2550\\u2550\\u2550\\u2550\\u255d \\u255a\\u2550\\u255d  \\u255a\\u2550\\u255d\\n\\n        mamba (0.7.4) supported by @QuantStack\\n\\n        GitHub:  https://github.com/mamba-org/mamba\\n        Twitter: https://twitter.com/QuantStack\\n\\n\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\u2588\\n\\n# packages in environment at /srv/conda/envs/notebook:\\n#\\n# Name                    Version                   Build  Channel\\n_libgcc_mutex             0.1                 conda_forge    conda-forge\\n_openmp_mutex             4.5                       0_gnu    conda-forge\\nalembic                   1.4.2              pyh9f0ad1d_0    conda-forge\\nasync_generator           1.10                       py_0    conda-forge\\nattrs                     19.3.0                     py_0    conda-forge\\nbackcall                  0.2.0              pyh9f0ad1d_0    conda-forge\\nbleach                    3.1.5              pyh9f0ad1d_0    conda-forge\\nblinker                   1.4                        py_1    conda-forge\\nbrotlipy                  0.7.0           py37h8f50634_1000    conda-forge\\nca-certificates           2020.6.20            hecda079_0    conda-forge\\ncertifi                   2020.6.20        py37hc8dfbb8_0    conda-forge\\ncertipy                   0.1.3                      py_0    conda-forge\\ncffi                      1.14.0           py37hd463f26_0    conda-forge\\nchardet                   3.0.4           py37hc8dfbb8_1006    conda-forge\\ncryptography              3.0              py37hb09aad4_0    conda-forge\\ndecorator                 4.4.2                      py_0    conda-forge\\ndefusedxml                0.6.0                      py_0    conda-forge\\nentrypoints               0.3             py37hc8dfbb8_1001    conda-forge\\nidna                      2.10               pyh9f0ad1d_0    conda-forge\\nimportlib-metadata        1.7.0            py37hc8dfbb8_0    conda-forge\\nimportlib_metadata        1.7.0                         0    conda-forge\\nipykernel                 5.3.4            py37h43977f1_0    conda-forge\\nipython                   7.16.1           py37h43977f1_0    conda-forge\\nipython_genutils          0.2.0                      py_1    conda-forge\\nipywidgets                7.5.1                      py_0    conda-forge\\njedi                      0.17.2           py37hc8dfbb8_0    conda-forge\\njinja2                    2.11.2             pyh9f0ad1d_0    conda-forge\\njson5                     0.9.4              pyh9f0ad1d_0    conda-forge\\njsonschema                3.2.0            py37hc8dfbb8_1    conda-forge\\njupyter-offlinenotebook   0.1.0                    pypi_0    pypi\\njupyter_client            6.1.6                      py_0    conda-forge\\njupyter_core              4.6.3            py37hc8dfbb8_1    conda-forge\\njupyter_telemetry         0.0.5                      py_0    conda-forge\\njupyterhub-base           1.1.0                    py37_2    conda-forge\\njupyterhub-singleuser     1.1.0                    py37_2    conda-forge\\njupyterlab                2.2.0                      py_0    conda-forge\\njupyterlab_server         1.2.0                      py_0    conda-forge\\nkrb5                      1.17.1               hfafb76e_1    conda-forge\\nld_impl_linux-64          2.34                 h53a641e_7    conda-forge\\nlibcurl                   7.71.1               hcdd3856_3    conda-forge\\nlibedit                   3.1.20191231         h46ee950_1    conda-forge\\nlibffi                    3.2.1             he1b5a44_1007    conda-forge\\nlibgcc-ng                 9.2.0                h24d8f2e_2    conda-forge\\nlibgomp                   9.2.0                h24d8f2e_2    conda-forge\\nlibsodium                 1.0.17               h516909a_0    conda-forge\\nlibssh2                   1.9.0                hab1572f_4    conda-forge\\nlibstdcxx-ng              9.2.0                hdf63c60_2    conda-forge\\nmako                      1.1.0                      py_0    conda-forge\\nmarkupsafe                1.1.1            py37h8f50634_1    conda-forge\\nmistune                   0.8.4           py37h8f50634_1001    conda-forge\\nnbconvert                 5.6.1            py37hc8dfbb8_1    conda-forge\\nnbformat                  5.0.7                      py_0    conda-forge\\nnbresuse                  0.3.3                      py_0    conda-forge\\nncurses                   6.2                  he1b5a44_1    conda-forge\\nnotebook                  6.0.3            py37hc8dfbb8_1    conda-forge\\nnteract_on_jupyter        2.1.3                      py_0    conda-forge\\noauthlib                  3.0.1                      py_0    conda-forge\\nopenssl                   1.1.1g               h516909a_0    conda-forge\\npackaging                 20.4               pyh9f0ad1d_0    conda-forge\\npamela                    1.0.0                      py_0    conda-forge\\npandoc                    2.10.1               h516909a_0    conda-forge\\npandocfilters             1.4.2                      py_1    conda-forge\\nparso                     0.7.1              pyh9f0ad1d_0    conda-forge\\npexpect                   4.8.0            py37hc8dfbb8_1    conda-forge\\npickleshare               0.7.5           py37hc8dfbb8_1001    conda-forge\\npip                       20.1.1                     py_1    conda-forge\\nprometheus_client         0.8.0              pyh9f0ad1d_0    conda-forge\\nprompt-toolkit            3.0.5                      py_1    conda-forge\\npsutil                    5.7.2            py37h8f50634_0    conda-forge\\nptyprocess                0.6.0                   py_1001    conda-forge\\npycparser                 2.20               pyh9f0ad1d_2    conda-forge\\npycurl                    7.43.0.5         py37hce7685b_2    conda-forge\\npygments                  2.6.1                      py_0    conda-forge\\npyjwt                     1.7.1                      py_0    conda-forge\\npyopenssl                 19.1.0                     py_1    conda-forge\\npyparsing                 2.4.7              pyh9f0ad1d_0    conda-forge\\npyrsistent                0.16.0           py37h8f50634_0    conda-forge\\npysocks                   1.7.1            py37hc8dfbb8_1    conda-forge\\npython                    3.7.8           h6f2ec95_0_cpython    conda-forge\\npython-dateutil           2.8.1                      py_0    conda-forge\\npython-editor             1.0.4                      py_0    conda-forge\\npython-json-logger        0.1.11                     py_0    conda-forge\\npython_abi                3.7                     1_cp37m    conda-forge\\npyzmq                     19.0.1           py37hac76be4_0    conda-forge\\nreadline                  8.0                  he28a2e2_2    conda-forge\\nrequests                  2.24.0             pyh9f0ad1d_0    conda-forge\\nruamel.yaml               0.16.6           py37h8f50634_1    conda-forge\\nruamel.yaml.clib          0.2.0            py37h8f50634_1    conda-forge\\nsend2trash                1.5.0                      py_0    conda-forge\\nsetuptools                49.2.0           py37hc8dfbb8_0    conda-forge\\nsix                       1.15.0             pyh9f0ad1d_0    conda-forge\\nsqlalchemy                1.3.18           py37h8f50634_0    conda-forge\\nsqlite                    3.32.3               hcee41ef_1    conda-forge\\nterminado                 0.8.3            py37hc8dfbb8_1    conda-forge\\ntestpath                  0.4.4                      py_0    conda-forge\\ntk                        8.6.10               hed695b0_0    conda-forge\\ntornado                   6.0.4            py37h8f50634_1    conda-forge\\ntraitlets                 4.3.3            py37hc8dfbb8_1    conda-forge\\nurllib3                   1.25.10                    py_0    conda-forge\\nwcwidth                   0.2.5              pyh9f0ad1d_0    conda-forge\\nwebencodings              0.5.1                      py_1    conda-forge\\nwheel                     0.34.2                     py_1    conda-forge\\nwidgetsnbextension        3.5.1            py37hc8dfbb8_1    conda-forge\\nxz                        5.2.5                h516909a_1    conda-forge\\nzeromq                    4.3.2                he1b5a44_2    conda-forge\\nzipp                      3.1.0                      py_0    conda-forge\\nzlib                      1.2.11            h516909a_1006    conda-forge\\n", "\\u001b[91mtime: 196.836\\n\\u001b[0m", "Removing intermediate container 88a5cf13354b\\n", "unknown parent image ID sha256:54f2edec8801f97942985d2fbd487147b1920c7703ad831e9f86433c50e2834d", "Built image, launching...\\n"]

agahkarakuzu commented 2 years ago

@ltetrel this one says built image launching but I cannot see a record of a book build on neuorlibre-data.conp.cloud for the latest commit I pushed. Looks like it could not make it to the book build somehow. Any idea how to debug this? The Binder log points to no error.

neurolibre / neurolibre-reviews